LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere07g0549	ATGGAAGCTCTTGACACAGAAACTCACACAGGAGGAGAGCTCCAAAAGATTCTGAAAGAGCGAAAGGTTTCGTGGGCAAAGCTCGGACGTGTGGACTCCCTCAATTTGGAAGCCGCAAGACTTCCTTTCACTCAAGCCCATTCTTCTACGAGAAGCTGGATAAGAACACTGAGCTTAGCATTTCAAAGCATAGGAATAATATATGGGGACATAGGCACGTCTCCTTTGTATGTGTATGCCAGCACTTTCAGTGACGGTCAAATTCACAACAGCGACGACATTCTTGGATGCTTGTCTCTCATCATCTATACCATTTTGGCCGTTCCATTTGTGAAGTACATTCTCGTTGTGTTGTGGGCTAACGACAACGGTGAAGGAGGTACGTTTGCTTTGTATTCCTTGCTTTGTCGACATGCAAAGTTGAGCTCAATCCCAAATTACCAACCGGAAGACAGAGAGCTTTCAAATTACAAACTGGAAACACCATCCAATTCCGTCGCACTAAGGCGAGCACAAAAGACAAAGCACATGCTTGAGAATAGTAAATTCGCCCCGCTTCTTATTTTCCTTGTTACTATCATGTCAACCTCTATGGTGATTGGAGACGGAATTCTTACGCCATCCATTTCAGTGCTTTCTGCAGTCAGCGGGATCAAATCTCTTGGAGAAGATGCCATTGTTGGGATCTCAGTAGCAATCCTGGTTGCCCTCTTCGCCGTCCAACGCTTTGGCACTGACAAAGTGGGCTTCTGCTTTGCCCCCATTGTCTTGCTGTGGTTCCTTATCCTTGGGGGCACAGGTCTGTACAACTTATTCAAGTATGATGTTGGTGTATTGCGTGCTTTCAATCCAAAATACATTGTGGATTACTTTCATAGGAATGGGAAGAAAGGTTGGATTTCTCTAGGCGGAGTTTTTATGTGCATTACAGGAACTGAGGCAATGTTTGCAGACTTGGGCCACTTCAACGTAAGAGCAGTTCAAATTAGCTTCTCCTTTGTTACGCTTCCAACACTAATTTGTGTATATAGTGGACAAGGAGCGTATCTCAGAAAGTTCCCTGAGCATGTAGATGATACCTTTTATAAGTCAGTACCTGACCCACTATACTGGCCAACATTTGTTGTGGCTGTAGCTGCTGCCATTGTTGCAAGCCAAGCTATGATTTCAGGGGCATTTTCTATAATTCAACAGTCCGTAAGTTTGAGTTGTTTTCCAAGAGTTAAGGTTGTGCATACATCAGCCAAGTATGAAGGTCAAGTCTACATACCCGAGATCAATTACCTTCTCATGATTGCTTGTGTCATTGTCACAGCAGCTTTCAGGACCACAGAAAATATTGGCCACGCTTATGGAATCGCTGTGTGTATCGTGATGGTGGTCACAACCTGCATGGTCACCCTTATAATGCTGGTTATATGGAAGACAAGCATATGGTGGATTGCTCTTTTCTTCATCGTATTCGGTTCGATAGAGATTGTGTATTTATCATCCATGCTAACCAAGTTCACACAAGGAGGCTTTCTTCCACTACTACTTTCGGTGTTCTTGATGACCATGATGGGCATATGGCACTACACACAAAAACAAAGGTACATGTTCGAGGTGAAGAACAAGGTTTCCGATGAACATCTAAGAGACTTAGCTAGCAATCCGTCGACACGCCGAATTCCGGGCGTAGCACTTCTGTACTCAGAGTTAGTTGAAGGTGTTCCTCCAATCTTTTCTCACTTCCTTGCCAACATACCATCCATTCACTCTGTGGTGGTGTTTGTGACCATAAAGTCCATCCCTGTCAGTGGAGTTGCATTGGAAGAGAGGTTTCTGTTTCGACAGGTGCAGCCCAAAGAGTACCGAATGTTTCGCTGCGTTGCGAGGTTTGGCTATAACGATGTGATTGGAGAACCCAAAGAGTTCGAGAGCCAATTAGTTGGGCAACTGAAGGAGTTTATTCGTTATCAAAGTCTCGCCACAAATGTGGTTGTGGGAGCAGAAGTAGATGCTGGTCAACAAGCAGATCATCATCGGTTATCTAGGGATGGAAAATCTTCGAATAGAATAATCCCATTAGTCCCCACACCTGACGATGATCCTCGGCCAACTAGTAAGTCTATTCTTGCTGTGGATGCATCTCGTGGCTCCTCTGGTTCAACTCAGTCAAATAGAACAGTTAAGTCTGCTACATTAATCTCCACTACTACTACACAAGCGCAGAGTGCTGGAGAGGAGATGGAGTTCGTGGAGAGAGCAATGGAGAAAAGCGTGGTGTATTTGCTGGGAGAGACCCAGGTGGTGGCACAGCCAGGGTCATCCTTACTCAAGAAGATAGCTGTCGATCATGTCTACAATTTCTTGAGGAAAAACTTTAGGCAAGGACATAATTCAATGGGAATCCCACATTCTAAGCTTCTGAGGGTTGGAATGACATATGAGATATGA	2439	0.4461	MEALDTETHTGGELQKILKERKVSWAKLGRVDSLNLEAARLPFTQAHSSTRSWIRTLSLAFQSIGIIYGDIGTSPLYVYASTFSDGQIHNSDDILGCLSLIIYTILAVPFVKYILVVLWANDNGEGGTFALYSLLCRHAKLSSIPNYQPEDRELSNYKLETPSNSVALRRAQKTKHMLENSKFAPLLIFLVTIMSTSMVIGDGILTPSISVLSAVSGIKSLGEDAIVGISVAILVALFAVQRFGTDKVGFCFAPIVLLWFLILGGTGLYNLFKYDVGVLRAFNPKYIVDYFHRNGKKGWISLGGVFMCITGTEAMFADLGHFNVRAVQISFSFVTLPTLICVYSGQGAYLRKFPEHVDDTFYKSVPDPLYWPTFVVAVAAAIVASQAMISGAFSIIQQSVSLSCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVIVTAAFRTTENIGHAYGIAVCIVMVVTTCMVTLIMLVIWKTSIWWIALFFIVFGSIEIVYLSSMLTKFTQGGFLPLLLSVFLMTMMGIWHYTQKQRYMFEVKNKVSDEHLRDLASNPSTRRIPGVALLYSELVEGVPPIFSHFLANIPSIHSVVVFVTIKSIPVSGVALEERFLFRQVQPKEYRMFRCVARFGYNDVIGEPKEFESQLVGQLKEFIRYQSLATNVVVGAEVDAGQQADHHRLSRDGKSSNRIIPLVPTPDDDPRPTSKSILAVDASRGSSGSTQSNRTVKSATLISTTTTQAQSAGEEMEFVERAMEKSVVYLLGETQVVAQPGSSLLKKIAVDHVYNFLRKNFRQGHNSMGIPHSKLLRVGMTYEI	812

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere07g0549	812	MobiDBLite	consensus disorder prediction	671	725	-	-
	Dere07g0549	812	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	49	811	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere07g0549	812	MobiDBLite	consensus disorder prediction	707	725	-	-
	Dere07g0549	812	Pfam	K+ potassium transporter	60	631	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere07g0549	812	NCBIfam	potassium uptake protein	59	812	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere07g0549	Dere-ChrDere07	8522655	8530311	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere07g0549	4	812	Inorganic Solute Cotransporters	AT4G13420	58.722	0.0	967