Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0537 ATGCCGAGGACGATCCACTACGGCGGCAGCGTTACCGACGAGGTTGAGGAGGTGATGGACGGTAAGGCTGAGGGCGAGGCGAAGCAGGGCATGCGGAAAGGGCCGTGGACGGCGGCGGAAGATGCGATCTTAATAGAGTACGTGAAGAAGTACGGTGAGGGGAATTGGAATTCGGTGCAGAGGAATTGTGGGTTGACGAGGTGCGGCAAGAGTTGCAGGCTCCGATGGGCCAACCATCTCAGGCCTAATCTCAAGAAAGGTGCTTTCTCCCCTGAGGAAGAGCAGATCATCATCGAGCTTCACGCCAAGCTCGGCAACAAATGGGCTCGCATGGCCTCCCTGTTACCTGGAAGGACTGATAATGAAATAAAGAATTTCTGGAACACAAGAATGAAGAGACGCCAGAGAGCTGGGTTACCTCTGTATCCTCCAGAAGTTCAAGACGAAGCTGCTCTCTATCATCTTCAACAGCACCAACAATACTTTGCGCCGCCACCTAACCCTCCTTCTTTCTCATTCTCTTCTCTCCTATCTTCCTCTAGCTACAGCCAGAAGCTCAATGACCAGCTAATCTATTCTGACTCTGATTCAGCTTATGACAGAACCAATCAACACCATCAAAACTTGAGTGTGCCATTAATGTCCTCTGTTTCGCCATATGGGCTTAATTACTCCAGTGGTGTGAAGACAGAGATCTCTTCGAGTCAATCGGATACTCCTGCTTCGTCCTACAGTACCAGTGGGGTTCATGGCTTGATGGGAGGCTCCAGCATTGGTGCTAGCATAGACTACTATGAGGTTGCACCATTGTCATCATCACCTGAAGGAAACAGTGGGCTTTTGGATGCTCTAGTGGAGGAGGCTCAAGCTCTTTCTCGCACTGGCAATTACAAGTCCAAGAGCGAGGATTCTACTACAGGAAGGAAGTTATCTTTGAAGAGGAAAAGCATGGCAGACGAGGAAGACACCGTGCCAGTGGAATCAGCTGTGAAGAATGATGAAACCCAGAAGGATGATTTGAGCTCTTCTCGATTGTCCACAGGGCAGAAGGCAATTAGTGAAAAGGATCCATTGGAGGAAATGAATTCCATGGACGATGACCTGTTTAGCCTGCTGAACAATTTTCCGTCAGAGATGCCAGTGCCTGAGTGGTACAGGAAAGGAGAAAGGCAATCACTGGAACTTGAAAGTCAACAAGATGCTTCACTGAGCCCCACTGATCAGCAACTCGCTTGGACCCTCGGAACCTGCTGGAACAACATGCCTAGCATTTACTAA 1278 0.4953 MPRTIHYGGSVTDEVEEVMDGKAEGEAKQGMRKGPWTAAEDAILIEYVKKYGEGNWNSVQRNCGLTRCGKSCRLRWANHLRPNLKKGAFSPEEEQIIIELHAKLGNKWARMASLLPGRTDNEIKNFWNTRMKRRQRAGLPLYPPEVQDEAALYHLQQHQQYFAPPPNPPSFSFSSLLSSSSYSQKLNDQLIYSDSDSAYDRTNQHHQNLSVPLMSSVSPYGLNYSSGVKTEISSSQSDTPASSYSTSGVHGLMGGSSIGASIDYYEVAPLSSSPEGNSGLLDALVEEAQALSRTGNYKSKSEDSTTGRKLSLKRKSMADEEDTVPVESAVKNDETQKDDLSSSRLSTGQKAISEKDPLEEMNSMDDDLFSLLNNFPSEMPVPEWYRKGERQSLELESQQDASLSPTDQQLAWTLGTCWNNMPSIY 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0537 425 Pfam Myb-like DNA-binding domain 36 95 - -
Dere07g0537 425 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
Dere07g0537 425 MobiDBLite consensus disorder prediction 302 340 - -
Dere07g0537 425 SUPERFAMILY Homeodomain-like 30 127 IPR009057 -
Dere07g0537 425 FunFam MYB-related transcription factor 32 85 - -
Dere07g0537 425 FunFam Transcription factor GAMYB 88 134 - -
Dere07g0537 425 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 80 IPR017930 -
Dere07g0537 425 Gene3D - 33 85 - -
Dere07g0537 425 MobiDBLite consensus disorder prediction 293 356 - -
Dere07g0537 425 CDD SANT 35 80 IPR001005 -
Dere07g0537 425 CDD SANT 88 129 IPR001005 -
Dere07g0537 425 ProSiteProfiles Myb-like domain profile. 28 80 IPR001005 -
Dere07g0537 425 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 23 419 - -
Dere07g0537 425 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Dere07g0537 425 SMART sant 32 82 IPR001005 -
Dere07g0537 425 SMART sant 85 133 IPR001005 -
Dere07g0537 425 Gene3D - 88 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0537 Dere-ChrDere07 8372006 8373924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0537 29 150 MYB Transcription Factor Family AT2G32460 80.328 5.18e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere07g0537 Myb_DNA-bind_6 4.2e-15 CL0123