Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0525 ATGATAACATGGCTTTTCCTATTGATGGTGATCACATCTAGCTACACAGCAAACTTGACTTCGATTCTTACCGTGGAACAGCTTTCATCACCCATCACAGGAATTGATAGTTTGATTGCGAGTAATTGGCCTATAGGATTCCAAGCAGGTTCATTTGCTTACAGCTATCTAAAAGATAGCCTTTTCATACCCAAATCAAGACTTGTTCCTTTGGGTTCACCTGAAGAATATGCAAGAGCTCTGCGGCAAGGGCCATTTGGTGGTGGGGTTGCAGCTATCATCGATGAGCTTCCATATGTGGAGTTGTTTCTGTCATCACAAACTGAGTTTGGTATAATTGGGCAGCCATTTACCAGAAGCACTTGGGGATTTGCTTTTCAAAAAGAGTCTCCTCTTGCTATTGATATGTCTACGGCAATCCTGAAACTTGCTGAGAATGGAGAGCTTCAGAAGATACATGAGAAGTGGCTCTGCAAGATGGGTTGCCCTGAAGAAAGAAGAAGCAGCTCTGAGCTTAACCGGCTTCACCTGAGTAGCTTCTGGGGTCTATATGTCTCATGTTCTGTGGTCTCTCTTTCTGCCCTTCTGGTATTTCTGCTCAGAACAATTTGCCAATATGGTCGCTATAATAAGCAAAAGCAAAATTCTTCGTCTTCGTTCTCAGAGCCATCGAGTAGCCATTGTTCTCATACTGTGTATAGCTTTTTTAACTTCTTTGATGAGAAGGAAGAGGCCATCAAGAAAATGTTCACTCAACATGACAACCCCAGCTCAAGCAGCAGCATAAACAGAGGCTCTCTGCGCTTTCTTCTTCTGGTTGGGGAAGAATTGAACAGTATAAAATGTTGGGTGCGATCTCTCGCACACACCAATAGCAAATCCCAACGTTATCATCATTTAAAAATACTCTCCAATTTTTCTGTCTGTAAAATCTGTAAATATCTCGTTTTTGCTCAAAAGCTGTGGAACTTGGTGGAGAATTCAAAACTTTTCCAAGCTTCTCTATCAGTGTTTGGCTTTGAGGTGCTTTGTTCTCCAGTACTGGCGCTGGTATAA 1056 0.4223 MITWLFLLMVITSSYTANLTSILTVEQLSSPITGIDSLIASNWPIGFQAGSFAYSYLKDSLFIPKSRLVPLGSPEEYARALRQGPFGGGVAAIIDELPYVELFLSSQTEFGIIGQPFTRSTWGFAFQKESPLAIDMSTAILKLAENGELQKIHEKWLCKMGCPEERRSSSELNRLHLSSFWGLYVSCSVVSLSALLVFLLRTICQYGRYNKQKQNSSSSFSEPSSSHCSHTVYSFFNFFDEKEEAIKKMFTQHDNPSSSSSINRGSLRFLLLVGEELNSIKCWVRSLAHTNSKSQRYHHLKILSNFSVCKICKYLVFAQKLWNLVENSKLFQASLSVFGFEVLCSPVLALV 351
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0525 351 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 219 IPR015683 -
Dere07g0525 351 Pfam Bacterial extracellular solute-binding proteins, family 3 13 157 IPR001638 -
Dere07g0525 351 FunFam Glutamate receptor 54 161 - -
Dere07g0525 351 Pfam Ligand-gated ion channel 1 187 IPR001320 GO:0015276|GO:0016020
Dere07g0525 351 Gene3D - 1 49 - -
Dere07g0525 351 Gene3D - 107 164 - -
Dere07g0525 351 SUPERFAMILY Periplasmic binding protein-like II 12 157 - -
Dere07g0525 351 SMART GluR_14 1 159 IPR001320 GO:0015276|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere07g0525 Dere-ChrDere07 8272074 8279660 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0525 1 261 Ion Channels AT2G32400 56.604 2.12e-93 296