Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0524 ATGGTTATGGCTAGGACACTATTCCTCTTGGTTTTCTGCTTGTGGATTACCCCAGAAGTAGTGGGTAGGACTGGAAATATCATTGCAAATAATACTAAGGTCCCTTCAAGACCAAGTGTTGTGAGAATTGGAGCATTGTTTACTTTCAATTCGGTCATTGGAAAATCAGCTAAACCCGCAATTTTAGCTGCCGTTGATGATGTTAATAACGATACGAGCATTCTTCCTGGTATTAAAATGGAAGTTATTTTACATGATACAAACTGCAGTGGTTTTCTTGGAACAGTGGAAGCTCTGCAGTTGATGGAGAATGACGTGGTTGCTGCTGTTGGTCCGCAGTCATCTGGAATAGCTCATGTTATCTCCCATGTTGTTAATGAACTCCATGTACCTCTTCTGTCATTTGGGGCAACTGATCCTACTCTTTCTTCTCTGCAGTACCCCTATTTTATTCGCACTACCCGGAATGACTATTTTCAGATGAATGCAATTGCAGACTTGATTGACTATTATGGATGGAGGGAGGTAATTGCCATCTTTGTAGATGATGATAATGGAAGAAGTGGAATATCTGCACTGGGTGATGCCTTGGCAAAGAAGCGTGCCAAGATCTCTTATAAGGCTGCCTTTACTCCTGGAGACCCTATAAGTAAAATAAGTGACTTGTTAAATGGGGTAAACTTAATGGAATCACGGGTCTATGTTCTCCATGTTAACCCTGATTCTGGTTTGACAATTTTTTCTACTGCAAAGAAGCTAGGGATGATGGGCAGTGGCTATGTCTGGATTGCCACAGATTGGCTTCCTTCTGTGTTGGATGCATCAGATCCAGTCGTCCCTGACACAATGAATGTCTTACAAGGGGTTATTGCTTTACGCCATCATACACCTGACACTGATCTGAAGAGGAGGTTTATCTCTAGGTTGAAAAACCTTAAAGACAAGGAGACTGCAAGCTTCAATTCTTATGCACTATATGCGTATGACTCAGTTTGGTTAGCAGCCCGTGCTCTTGATGCTTTTCTTAATGATGGTGGAAATATATCTTTCTCTAGTGACCCTAGATTGCAGGACGCAAATGGAAGCATGTTGCATTTAGTATCACTTCGTACTTTTGATGCTGGCCCACAGTTTCTCCAGACAATCCTGAGAATGAACTTCACTGGTCTGAGTGGTCAATTTCAGTTTGATGCAGAGAAGAATTTAATCCATCCGGCATATGATATTCTAAACATTGGTGGATCTGCCCGTAGAATAGGTTATTGGTCTAATTACTCAGGTCTGTCAGTTGTGGCTCCTGAAATTTTATATACAAAGCCACCTAACACTTCAACTAGCAATCAACATCTTTATGGTGTGATATGGCCTGGAGAGACTACAACAAGACCAAAGGGATGGGTGTTCCCCAACAATGGAAAGCCTCTGCGAATAGCAGTGCCAAACCGAATAAGCTACATGGAATTTGTTGCCAAAGACAAGGATCCCCCAGGGGTAAAAGGTTATTGCATTGATGTCTTTGAAGCAGCCTTAAACCTGTTGCCTTATCCTGTCCCACGACAATACATATTATATGGAAATGGCCAGAGACTACCTAACTACGATGCACTTGTGAATGAGGTTGCACAAAATAATTTTGATGCAGTTGTGGGAGATGTTACAATTGTCACAAACAGGACGAGGATTGTGGATTTCACTCAACCTTTTACGGAATCAGGGTTGGTTGTAGTTGTTCCTGTCAAGGAGGTGAAGTCTAGCCCCTGGTCATTCCTCAAACCATTCACTGCTCAAATGTGGTGTGTCACCGGTGCCTTCTTTCTGTTTGTGGGAGCTGTGGTATGGATTCTTGAGCACCGGTTCAATCCTGAGTTCCGCGGTCCACCAAGGAAACAACTTGTGACAATTTTTTGGTTTAGCTTGTCAACAATGTTTTTCTCACACAGAGAAAACACCGTGAGCACTCTGGGGCGATTGGTGTTAATAATATGGCTTTTTGTGGTGTTAATTATCAATTCAAGCTACACTGCTAGCTTGACATCAATCCTCACAGTGCAACAACTCTCATCACAAATTGAAGGACTTGATAGCTTGATCTCAAGTAATCAACCTATCGGAGTTCAAGATGGATCATTTGCGCGGAAATATCTGATAGATGAGCTCAATGTAGCTGAATCTAGGCTCGTGACGTTGAAAAACCAGCAGGCTTATATTGATGCATTTCAACGTGGTCCGCGAGACGGAGGGGTGGTGGCAGTTATTGATGAGCTTCCTTATATAGAGATATTAATGTCCACCACCAATTGTCAGTTCAGAACTGTAGGCCAGGAGTTCACTAAAAGTGGATGGGGATTTGCATTCCAGAGGGACTCTCCCCTCGCCGTCGACTTGTCAACCGCCATTCTTCAACTCTCTGAGAACGGCGACTTGCAAATGATCCATGACAAATGGCTCTCAAAGTATAGTTGTCCTGCTCAACTCAGTGACGTTGATTCGAACAAACTATCTCTGAGTAGCTTCTGGGGCCTCTTTCTGATATGTGGGATTGCATGTTTCCTTGCTCTGGTTGCATTCTTCACTAGGGTGTTTTGTCAATATATGAAATTTATCCCAGAGGCTGAGGAGGCTAGCGAGCAAATTGAGTCAGCCAGGAGAAGAAGGACAAGCAGATCCACCAGCTTCAAGAACTTGATTGATTTTGTAGATAAAAAGGAAGCCGAAATAAAGGAGATACTGAGGCATAAGAGTAACAAACGGCGGCGCAGTCAGAGCTTAGAGAGGAGCTTTGACAGGCAATCCAATTATTCAAACAGCTAG 2811 0.4297 MVMARTLFLLVFCLWITPEVVGRTGNIIANNTKVPSRPSVVRIGALFTFNSVIGKSAKPAILAAVDDVNNDTSILPGIKMEVILHDTNCSGFLGTVEALQLMENDVVAAVGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSSLQYPYFIRTTRNDYFQMNAIADLIDYYGWREVIAIFVDDDNGRSGISALGDALAKKRAKISYKAAFTPGDPISKISDLLNGVNLMESRVYVLHVNPDSGLTIFSTAKKLGMMGSGYVWIATDWLPSVLDASDPVVPDTMNVLQGVIALRHHTPDTDLKRRFISRLKNLKDKETASFNSYALYAYDSVWLAARALDAFLNDGGNISFSSDPRLQDANGSMLHLVSLRTFDAGPQFLQTILRMNFTGLSGQFQFDAEKNLIHPAYDILNIGGSARRIGYWSNYSGLSVVAPEILYTKPPNTSTSNQHLYGVIWPGETTTRPKGWVFPNNGKPLRIAVPNRISYMEFVAKDKDPPGVKGYCIDVFEAALNLLPYPVPRQYILYGNGQRLPNYDALVNEVAQNNFDAVVGDVTIVTNRTRIVDFTQPFTESGLVVVVPVKEVKSSPWSFLKPFTAQMWCVTGAFFLFVGAVVWILEHRFNPEFRGPPRKQLVTIFWFSLSTMFFSHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGLDSLISSNQPIGVQDGSFARKYLIDELNVAESRLVTLKNQQAYIDAFQRGPRDGGVVAVIDELPYIEILMSTTNCQFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQMIHDKWLSKYSCPAQLSDVDSNKLSLSSFWGLFLICGIACFLALVAFFTRVFCQYMKFIPEAEEASEQIESARRRRTSRSTSFKNLIDFVDKKEAEIKEILRHKSNKRRRSQSLERSFDRQSNYSNS 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0524 936 MobiDBLite consensus disorder prediction 914 936 - -
Dere07g0524 936 Pfam Receptor family ligand binding region 58 413 IPR001828 -
Dere07g0524 936 Coils Coil 899 919 - -
Dere07g0524 936 Gene3D - 60 404 - -
Dere07g0524 936 Gene3D - 470 585 - -
Dere07g0524 936 CDD GluR_Plant 473 816 - -
Dere07g0524 936 PIRSF IGluLR_plant 1 936 IPR017103 -
Dere07g0524 936 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 54 70 - -
Dere07g0524 936 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 327 339 - -
Dere07g0524 936 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 114 142 - -
Dere07g0524 936 Gene3D - 156 428 - -
Dere07g0524 936 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 885 IPR015683 -
Dere07g0524 936 SUPERFAMILY Periplasmic binding protein-like I 36 467 IPR028082 -
Dere07g0524 936 Pfam Ligand-gated ion channel 818 849 IPR001320 GO:0015276|GO:0016020
Dere07g0524 936 Gene3D - 586 706 - -
Dere07g0524 936 FunFam Glutamate receptor 586 716 - -
Dere07g0524 936 FunFam Glutamate receptor 156 322 - -
Dere07g0524 936 CDD PBP1_GABAb_receptor_plant 42 432 IPR044440 -
Dere07g0524 936 SMART GluR_14 476 818 IPR001320 GO:0015276|GO:0016020
Dere07g0524 936 FunFam Glutamate receptor 712 820 - -
Dere07g0524 936 SUPERFAMILY Periplasmic binding protein-like II 451 816 - -
Dere07g0524 936 FunFam Glutamate receptor 470 586 - -
Dere07g0524 936 Gene3D - 709 820 - -
Dere07g0524 936 Pfam Bacterial extracellular solute-binding proteins, family 3 530 817 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0524 Dere-ChrDere07 8266818 8271987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0524 5 783 Ion Channels AT1G05200 67.386 0.0 1135