Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0523 ATGAGAGAGCAGTGGCACCATTCTCTGTATTATGTTCTACAATTGGCCAAATGTCGTGTCTTTCAGATTCCAAAAAGACTAATCCTGGAGAGCAGGTCGCTGACTAGAAATACTTGCTCAGAATCCACTAGCCTGAATTGCTTGAGTTTCCTTAGCGTCTCAGTTTCTCTGCTTGCTCTTGAAAGAACTGGCAACTGGGTTGCTGACCCATTTTCAGGTGTTATTTTTTTAGGGATACTGCTATCTGGGCCTGCTTCTGTAAACATTGCAGCAGTTTTCACTTTTGATTCGGTCATAGGTAAAGCTGCAAAGGCGGCTATGGAATTGGCAGTTTCTGACGTCAATGCAGACCCCAGAATCCTCAATGGGACGAAGCTGGAGTTGATAATGGAGGATGCAAGTTGCAACGTCTTTTTGGGATTAATCGGAGCTTTCCGGGCACTTAATAAAGGGGTTGCAGCCATAATAGGTCCACAGTCATCTTCAATAGCTCATATGATTTCTCAAATTGCTAATGGTCTCCAAGTGCCTCTTATTTCATATGCTGCCACTGATCCAACCCTTTCCTCACTTCAGTTCCCTTACTTTTTCCGAACTGTGCAAAGTGACTCTATTCAAATGTCTGCAATGGCTGATCTAATTGATTTTCATGAATGGAAGGAGGTGATTGCTGTCTTCTTGGATGATGATCATGGAAGAAATGGAATATCTGCTTTGGATAATGAACTTGGGAAAAGGAATTTAAAAAGTGCTCATAAATTACCCTTGAGTGTTTATTTTGAAGAGAATGAAGTCACTCTCCTGCTCAATCAACCCAGATTGCTTGGTCCTCGAGTCTATGTTGTTCACAAAGAAGGTAAAGTAAATAGTGGCTTGAATGCTTATGATACAATCTGGAAAGCTGCAAGTTCAATTGATAAGTTTATCAAAGTACACAAAAATATGTCATTTTCTCCCAATGAGAGCTATAAAAATCAAACAGGAGCGGCTAATATTCAACTTGACAAGCTCAAAGTCTTCACTGGTGGATCTTATCTTGTAGACGTATTACTACAGTCAAATTTTACTGGTGTGAGTGGTCAACTTAGTTTTAATTCAGACAGGAACATCATAGGTAGTGGCTATGATGTTATAAATGTCAATCACATGGAAATTACTAGGGTTGGTTATTGGTCTAATTATTCAGGATTGTCAATTGTACCTCCTGAAAACCTTAAAGAGAAAGAACATGGCAGTTTTAACCAAGACCAGAAGCTTAGACATATAACTTGGCCAGGTGGAAAGAAAGAAAGACCACGTGGCTGGCTAATTGCCTCCAATGCGAGACCACTGAGAATTGGAGTGCCCAAGAGAGCAAGCTTCGTTGAATTTGTCACTGAATTGCCTGAAACTCATGAAATTCAAGGATACTGCATTGATGTCTTTAAGAAAGCACTGGAATTCATACCATATGATGTATATGATGCAGTTGTTGGAGATATTGCAATAGTGACAAACAGAGCAAGGGTTGCGGATTTTTCTCAGCCTTTTGCAACAACTAGCCTTGTCATACTTGCTCCAATAAAAACTGCAAAGTCAAGTGCTTGGGTGTTTCTTAAACCATTCACATCAGATATGTGGTGTGCCACCGCAGCTTCATTTGTAGTGGTTGGAGTGGTTATATGGATTCTCGAGCACCGAGTCAATGACGATTTCCGAGGTCCTTTCAGAAGACAACTTGCAAGAATGATTATGTTTAGCCTCTCAACATTGTTTAAGACAAATCGTAAGCAAATCTTTGCCTCTATTGTCTACTAG 1797 0.4029 MREQWHHSLYYVLQLAKCRVFQIPKRLILESRSLTRNTCSESTSLNCLSFLSVSVSLLALERTGNWVADPFSGVIFLGILLSGPASVNIAAVFTFDSVIGKAAKAAMELAVSDVNADPRILNGTKLELIMEDASCNVFLGLIGAFRALNKGVAAIIGPQSSSIAHMISQIANGLQVPLISYAATDPTLSSLQFPYFFRTVQSDSIQMSAMADLIDFHEWKEVIAVFLDDDHGRNGISALDNELGKRNLKSAHKLPLSVYFEENEVTLLLNQPRLLGPRVYVVHKEGKVNSGLNAYDTIWKAASSIDKFIKVHKNMSFSPNESYKNQTGAANIQLDKLKVFTGGSYLVDVLLQSNFTGVSGQLSFNSDRNIIGSGYDVINVNHMEITRVGYWSNYSGLSIVPPENLKEKEHGSFNQDQKLRHITWPGGKKERPRGWLIASNARPLRIGVPKRASFVEFVTELPETHEIQGYCIDVFKKALEFIPYDVYDAVVGDIAIVTNRARVADFSQPFATTSLVILAPIKTAKSSAWVFLKPFTSDMWCATAASFVVVGVVIWILEHRVNDDFRGPFRRQLARMIMFSLSTLFKTNRKQIFASIVY 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0523 598 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 88 583 IPR015683 -
Dere07g0523 598 SUPERFAMILY Periplasmic binding protein-like II 431 543 - -
Dere07g0523 598 Gene3D - 339 441 - -
Dere07g0523 598 Gene3D - 527 594 - -
Dere07g0523 598 SMART GluR_14 443 595 IPR001320 GO:0015276|GO:0016020
Dere07g0523 598 SUPERFAMILY Periplasmic binding protein-like I 82 397 IPR028082 -
Dere07g0523 598 Pfam Receptor family ligand binding region 288 382 IPR001828 -
Dere07g0523 598 Pfam Receptor family ligand binding region 104 252 IPR001828 -
Dere07g0523 598 Gene3D - 105 201 - -
Dere07g0523 598 Gene3D - 202 255 - -
Dere07g0523 598 Gene3D - 442 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0523 Dere-ChrDere07 8255167 8258283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0523 291 596 Ion Channels AT2G32400 46.407 2.81e-97 315