Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0522 ATGATAACATGGCTTTTCCTATTGATGGTGATCACATCTAGCTACACAGCAAACTTGACTTCGATTCTTACCGTGGAACAGCTTTCATCACCCATCACAGGAATTGATAGTTTGATTGCGAGTAATTGGCCTATAGGATTCCAAGCAGGTTCATTTGCTTACAGCTATCTAAAAGATAGCCTTTTCATACCCAAATCAAGACTTGTTCCTTTGGGTTCACCTGAAGAATATGCAAGAGCTCTGCGGCAAGGGCCATTTGGTGGTGGGGTTGCAGCTATCATCGATGAGCTTCCATATGTGGAGTTGTTTCTGTCATCACAAACTGAGTTTGGTATAATTGGGCAGCCATTTACCAGAAGCACTTGGGGATTTGCTTTTCAAAGAGAATCTCCTCTTGCTATTGACATGTCTACGGCAATCTTGAAACTTGCTGAGAATGGAGAGCTTCAGAAGATACATGAGAAGTGGCTCTGCAAGATGGGCTGCCCTTCTGGTATTTCTGCTCAGAACAATTTGCCAATATGGTCGCTATAA 534 0.4288 MITWLFLLMVITSSYTANLTSILTVEQLSSPITGIDSLIASNWPIGFQAGSFAYSYLKDSLFIPKSRLVPLGSPEEYARALRQGPFGGGVAAIIDELPYVELFLSSQTEFGIIGQPFTRSTWGFAFQRESPLAIDMSTAILKLAENGELQKIHEKWLCKMGCPSGISAQNNLPIWSL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0522 177 Gene3D - 1 53 - -
Dere07g0522 177 Gene3D - 106 164 - -
Dere07g0522 177 SUPERFAMILY Periplasmic binding protein-like II 12 157 - -
Dere07g0522 177 FunFam Glutamate receptor 54 161 - -
Dere07g0522 177 Pfam Bacterial extracellular solute-binding proteins, family 3 12 157 IPR001638 -
Dere07g0522 177 SMART GluR_14 1 159 IPR001320 GO:0015276|GO:0016020
Dere07g0522 177 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 162 IPR015683 -
Dere07g0522 177 Pfam Ligand-gated ion channel 1 11 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0522 Dere-ChrDere07 8252001 8252881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0522 1 162 Ion Channels AT1G42540 67.284 2.63e-71 229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0828 08 12049517 12053447 Dere07g0522 07 8252001 8252881 CCT
Dere07g0522 07 8252001 8252881 Dere08g0830 08 12058511 12063467 CCT
Dere07g0522 07 8252001 8252881 Dere07g0522 07 8252001 8252881 ECH