Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0521 ATGGTTATGGCTAGGACACTATTCCTCTTGGTTTTCTGCTTGTGGATTACCCCAGAAGTAGTGGGTAGGACTGGAAATATCATTGCAAATAATACTAAAGTCCCTTCAAGACCAAGTGTTGTGAGAATTGGAGCATTGTTTACTTTCAATTCGGTCATTGGAAAATCAGCTAAACCCGCAATTTTAGCTGCCGTTGATGATGTTAATAACGATACGAGCATTCTTCCTGGTATTAAAATGGAAGTTATTTTACATGATACAAACTGCAGTGGTTTTCTTGGAACAGTGGAAGGTTCTTTCTTGTGGCTTTTCAATTACAATGTCAAGAGCTATGGCTTTCGTATTAAGAAAGTAAGCAAGCTTGATGAGTTTCCTGATCTTGTAGCTCTGCAGTTGATGCAGAATGACGTGGTCGCTGCTGTTGGTCCGCAGTCATCTGGAATAGCTCATGTTATCTCCCATGTTGTTAATGAACTCCATGTAATTGCCATCTTTGTAGATGATGATAATGGAAGAAGTGGAATATCTGCACTGGGTGATGCCTTGGCAAAGAAGCGTGCCAAGATCTCTTATAAGGCTGCCTTTACTCCTGGAGACCCTATAAGTAAAATAAGTGACTTGTTAAATGGGGTAAACTTAATGGAATCACGGGTCTATGTTCTCCATGTTAACCCTGATTCTGGTTTGACAATTTTTTCTACTGCAAAGAAGCTAGGGATGATGGGCAGTGGCTATGTCTGGATTGCCACAGATTGGCTTCCTTCTGTGTTGGATGCATCAGATCCAGTCGTCCCTGACACAATGAATGTCTTACAAGGGGTTATTGCTTTACGCCATCATACACCTGACACTGATCTGAAGAGGAGGTTTATCTCTAGGTTGAAAAACCTTAAAGACAAGGAGACTGCAAGCTTCAATTCTTATGCACTATATGCGTATGACTCAGTTTGGTTAGCAGCCCGTGCTCTTGATGCTTTTCTTAATGATGGTGGAAATATATCTTTCTCTAGTGACCCTAGATTGCAGGACGCAAATGGAAGCATGTTGCATTTAGTATCACTTCGTACTTTTGATGCTGGCCCACAGTTTCTCCAGACAATCCTGAGAATGAACTTCACTGGTCTGAGTGGTCAATTTCAGTTTGATGCAGAGAAGAATTTAATCCATCCGGCATATGATATTCTAAACATTGGTGGATCTGCCCATAGAATAGGTTATTGGTCTAATTACTCAGGTCTGTCAGTTGTGGCTCCTGAAATTTTATATACAAAGCCACCTAACACTTCAACTAGCAATCAACATCTTTATGGTGTGATATGGCCTGGAGAGACTAAAACAAGACCAAAGGGATGGGTGTTCCCCAACAATGGAAAGCCTCTGCGAATAGCAGTGCCAAACCGAATAAGCTACATGGAATTTGTTGCCAAAGACAAGGATCCCCCAGGGGTAAAAGGTTATTGCATTGATGTCTTTGAAGCAGCCTTAAACCTGTTGCCTTATCCTGTCCCACGACAATACATATTATATGGAAATGGCCAGAGACTACCTAACTATGATGCACTTGTGAATGAGGTTGCACAAAATTCAATGACATTGCCTTTGCTAGTATTGCTTATCATAGCATATTGTTTGCTGTTGTATGGTGGACTGCAAGTCAGACTTGAGATAAAATTGCAACAACTCTCATTGCAAATTGAAGGACTTGATAGCTTGATCTCAAGTAATCAACCTATCGGAGTTCAAGATGGGTCATTTGCACAGAAATATCTGATAGATGAGCTCAATGTAGCTGAATCTAGGCTTGTGACTTTGAAAAACCTGCAGGCTTATATTGATGCATTTCAACGTGGTCTGCGAGATGGAGGGGTGGTGGCAGTTATTGATGAGCTTCCTTATATAGAGATATTAATGTCCACCACCAATTGTCAGTTCAGAACTGTAGGCCTGGAGTTCACTAAAAGTGGATGGGGATTTGCATTCCAGAGGGACTCTCCCCTCACCGTCGACTTGTCAACCGCCATTCTTCAACTCTCTGAGAACGGCGACTTGCAAATGATCCATGACAAATGGCTCTCAAAGTATAGTTGTCCTGCTCAACTAAGTGACGTTGATTCAAACAAACTATCTCTGAGTAGCTTCTGGGGCCTCTTTCTGATATGTGGGATTGCATGTTTCCTTGCTCTGGTTGCATTCTTCACTAGGGTGTTTTGTCAATATATGAAATTTATCCCAGAGGCTGAGGAGGCTAGCGAGCAAACTGAGTCAGCCAGGAGAAGAAGGACAAGCAGATCCACCAGCTTCAAGAACTTAATTGATTTTGTAGATAAAAAGGAAGCCGAGATAAAGGAGATACTGAGGCATAAGAGTAACAAACGGCGGCGGCAGTCAGAGTTTAGAGAGGAGCTTTGA 2409 0.4193 MVMARTLFLLVFCLWITPEVVGRTGNIIANNTKVPSRPSVVRIGALFTFNSVIGKSAKPAILAAVDDVNNDTSILPGIKMEVILHDTNCSGFLGTVEGSFLWLFNYNVKSYGFRIKKVSKLDEFPDLVALQLMQNDVVAAVGPQSSGIAHVISHVVNELHVIAIFVDDDNGRSGISALGDALAKKRAKISYKAAFTPGDPISKISDLLNGVNLMESRVYVLHVNPDSGLTIFSTAKKLGMMGSGYVWIATDWLPSVLDASDPVVPDTMNVLQGVIALRHHTPDTDLKRRFISRLKNLKDKETASFNSYALYAYDSVWLAARALDAFLNDGGNISFSSDPRLQDANGSMLHLVSLRTFDAGPQFLQTILRMNFTGLSGQFQFDAEKNLIHPAYDILNIGGSAHRIGYWSNYSGLSVVAPEILYTKPPNTSTSNQHLYGVIWPGETKTRPKGWVFPNNGKPLRIAVPNRISYMEFVAKDKDPPGVKGYCIDVFEAALNLLPYPVPRQYILYGNGQRLPNYDALVNEVAQNSMTLPLLVLLIIAYCLLLYGGLQVRLEIKLQQLSLQIEGLDSLISSNQPIGVQDGSFAQKYLIDELNVAESRLVTLKNLQAYIDAFQRGLRDGGVVAVIDELPYIEILMSTTNCQFRTVGLEFTKSGWGFAFQRDSPLTVDLSTAILQLSENGDLQMIHDKWLSKYSCPAQLSDVDSNKLSLSSFWGLFLICGIACFLALVAFFTRVFCQYMKFIPEAEEASEQTESARRRRTSRSTSFKNLIDFVDKKEAEIKEILRHKSNKRRRQSEFREEL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0521 802 Gene3D - 60 161 - -
Dere07g0521 802 Gene3D - 564 660 - -
Dere07g0521 802 Gene3D - 661 690 - -
Dere07g0521 802 SUPERFAMILY Periplasmic binding protein-like II 456 693 - -
Dere07g0521 802 FunFam Glutamate receptor 587 695 - -
Dere07g0521 802 FunFam Glutamate receptor 143 307 - -
Dere07g0521 802 Gene3D - 162 413 - -
Dere07g0521 802 PIRSF IGluLR_plant 1 110 IPR017103 -
Dere07g0521 802 PIRSF IGluLR_plant 116 161 IPR017103 -
Dere07g0521 802 PIRSF IGluLR_plant 159 531 IPR017103 -
Dere07g0521 802 PIRSF IGluLR_plant 556 801 IPR017103 -
Dere07g0521 802 Pfam Bacterial extracellular solute-binding proteins, family 3 564 692 IPR001638 -
Dere07g0521 802 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 312 324 - -
Dere07g0521 802 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 723 745 - -
Dere07g0521 802 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 54 70 - -
Dere07g0521 802 Gene3D - 279 389 - -
Dere07g0521 802 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 528 IPR015683 -
Dere07g0521 802 Pfam Receptor family ligand binding region 160 398 IPR001828 -
Dere07g0521 802 SMART GluR_14 461 693 IPR001320 GO:0015276|GO:0016020
Dere07g0521 802 SUPERFAMILY Periplasmic binding protein-like I 36 452 IPR028082 -
Dere07g0521 802 Coils Coil 774 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0521 Dere-ChrDere07 8241725 8246868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0521 522 658 Ion Channels AT1G05200 51.079 2.73e-36 145