Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0510 ATGGCTGATATGGATCGCTCTTCTGATAATGTTTGTGCAGTTTCTACAGAGCAATCCAGTCAAGCTTCCAAGGCTGAGTTTTCTGAAGATGAGGAAACCCTTATAACCAGGATGTACAATCTGGTTGGAGAGAGGTGGGCCTTGATTGCTGGAAGAATCCCTGGACGAACAGCAGAGGAGATAGAGACGTACTGGACTTCAAGATACTCAACTAGTGAATAA 222 0.4459 MADMDRSSDNVCAVSTEQSSQASKAEFSEDEETLITRMYNLVGERWALIAGRIPGRTAEEIETYWTSRYSTSE 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0510 73 Gene3D - 26 68 - -
Dere07g0510 73 MobiDBLite consensus disorder prediction 9 23 - -
Dere07g0510 73 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 22 70 - -
Dere07g0510 73 CDD SANT 26 65 IPR001005 -
Dere07g0510 73 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 73 IPR017930 -
Dere07g0510 73 MobiDBLite consensus disorder prediction 1 29 - -
Dere07g0510 73 SUPERFAMILY Homeodomain-like 24 69 IPR009057 -
Dere07g0510 73 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Dere07g0510 73 FunFam MYB-like transcription factor 26 68 - -
Dere07g0510 73 Pfam Myb-like DNA-binding domain 26 66 IPR001005 -
Dere07g0510 73 SMART sant 23 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0510 Dere-ChrDere07 8159048 8159791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0510 19 70 MYB Transcription Factor Family AT5G14750 44.231 1.07e-14 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere07g0510 Myb_DNA-binding 1.3e-08 CL0123