Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0506 ATGGAGGCACTGCGTTCAATGCATCATACATCGTTCGTTTCTGAAGATATTCATGAGGCTTCCTGGAAAGAATCAGCAAATTCAGCAGTTGCTACCTCTTCAGATTCACCAGAAGATGAAAGGGGTTCATATGAGCTTCTCTACAAAAGCATTCTGGCAACGCGGAGCATTGCAAACAACATGAGGATGGGAAGCCAGAGTTACTTGAGGGCTTTGATTGTGTGTCTCATAGCAATTATTGGATCAACTCAGGCTCAATTGAAGCCAGATTTTTATGCCACGAGCTGCCCAAAAGCTGAGGAGATCGTCTTCAACTTTGTTAATGAGCATATCCGCAATGCCCCTTCATTGGCAGCTGCCCTCATTAGAATGCAGTTCCATGACTGCTTTATCAGGGGGTGTGATGCATCAGTGCTCCTGAACTCAACAACCAACCAAGCTGAGAAGAATGCTGCTCCAAATCTTACTCTCAGAGGCTTTGACTTCATTGACAGAATAAAAAGCCTAGTTGAAGCTGAATGCCCTGGTGTAGTCTCTTGTGCCGATATTATAGCACTGACTGCCAGAGACGCTATTGTTGCCACTGGTGGTCCCTTCTGGAATGTTACAACAGGTAGGAGGGATGGGACCGTCTCTAACTCAACAGAAGCCCTACTCGGCATCCCAGCTCCATTTCAGAACATCACCGTCCTCCAAGGACTCTTTGCCAACGTGGGACTTGATTTGAAAGACTTGGTCCTTCTCTCAGGTGCACACACAATTGGTGTCTCCCATTGCCCATCATTCTCAGACCGCCTGTACAACTTCACTGGAAATGGTGACGAAGACCCAGCTCTAGACAGTGAATATGCAGCAAATCTCAGAAAATTCAAGTGCAAGACCATCAATGATAATACCACACTTGTTGAGATGGACCCTGGAAGCCGCAAGACATTTGATCTAAGCTACTATGTTCAAGTGGTTAAGAGAAGGGGTCTTTTCCAATCAGATGCTACATTATTGACAAACTCAGTTACAAAATCTACCATCACCCAACTGCTTCAGGGTTCACTTGAGAATTTCTTTGCTGAATTTGCCAAGTCTATGGAGAAATTGATCCTAGTCAATGTTAAGACTGGGACACAAGGGGAGATCAGGAAGCAGTGTGCACTTGTAAATAGCTAA 1164 0.451 MEALRSMHHTSFVSEDIHEASWKESANSAVATSSDSPEDERGSYELLYKSILATRSIANNMRMGSQSYLRALIVCLIAIIGSTQAQLKPDFYATSCPKAEEIVFNFVNEHIRNAPSLAAALIRMQFHDCFIRGCDASVLLNSTTNQAEKNAAPNLTLRGFDFIDRIKSLVEAECPGVVSCADIIALTARDAIVATGGPFWNVTTGRRDGTVSNSTEALLGIPAPFQNITVLQGLFANVGLDLKDLVLLSGAHTIGVSHCPSFSDRLYNFTGNGDEDPALDSEYAANLRKFKCKTINDNTTLVEMDPGSRKTFDLSYYVQVVKRRGLFQSDATLLTNSVTKSTITQLLQGSLENFFAEFAKSMEKLILVNVKTGTQGEIRKQCALVNS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0506 387 FunFam Peroxidase 90 238 - -
Dere07g0506 387 Gene3D Peroxidase, domain 2 222 365 - -
Dere07g0506 387 CDD secretory_peroxidase 86 385 IPR033905 GO:0004601|GO:0042744
Dere07g0506 387 PRINTS Haem peroxidase superfamily signature 118 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Haem peroxidase superfamily signature 178 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Haem peroxidase superfamily signature 305 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Haem peroxidase superfamily signature 196 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 FunFam Peroxidase 222 365 - -
Dere07g0506 387 ProSitePatterns Peroxidases proximal heme-ligand signature. 244 254 IPR019793 -
Dere07g0506 387 ProSiteProfiles Plant heme peroxidase family profile. 86 386 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Plant peroxidase signature 303 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Plant peroxidase signature 319 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Plant peroxidase signature 96 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Plant peroxidase signature 158 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Plant peroxidase signature 360 373 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Plant peroxidase signature 177 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Plant peroxidase signature 196 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Plant peroxidase signature 243 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 PRINTS Plant peroxidase signature 120 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 ProSitePatterns Peroxidases active site signature. 118 129 IPR019794 GO:0004601
Dere07g0506 387 PANTHER PEROXIDASE 25-RELATED 77 379 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 Pfam Peroxidase 105 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere07g0506 387 Gene3D - 91 386 - -
Dere07g0506 387 SUPERFAMILY Heme-dependent peroxidases 86 386 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0506 Dere-ChrDere07 8128765 8131741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0506 76 387 Peroxidase AT1G05260 68.910 5.14e-165 463