Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0502 ATGGAACCTCTGTGTGATCTTTGTGGGGTTGTGAGAGCGGTGGTATACTGCAAGTTAGATTCTGCTCGTCTCTGCTTGAATTGCGATGGCTATGTACACTCTGCCAATGCTTTGTCACATCGTCATCCTCGTTCTCTCTTGTGTGATAAGTGCAATTCCCAGCCAGCAATTGCCCGCTGCATGTATGATAAAATGTCTCTATGTCAATCTTGTGACCGGAACCCAAATGGCTGTTCAGTATTGGGACATAGGCATCAGACATTGAGTTCTTACACGGGTTGTCCTTCTTCGGCCGAGATCTCAAAAATATGGTCCTCTGTTCTTGACGCTCCTTGTCCAGGTGGTCCTGATATTACTGGTTGTGGATCACTTAGCACATTGCCTAAGAATGAGCAACCAGATTATGGTGCCTCCTTTGGTTTGGTGACTGGCAAGTTGAATGAAATAGAAGCATGTGTCAAATATGAACCTTGGATGGGGCAATCTTCTAATATTGTGCCACCAAATCCAAATCACCTGTCATCCGGCAAAGATCACCCTTTTTTCTTTCCTCTTGACTCGGACCTGCCAAAGGGATGTCCTAAATGCAAGGATCTTGGAATTCTTGATGGCGATGATCTTTGTGAATGTCTCAACATGGATGATCTTCAAATATACTTTGAAAGTGGTGATGAAATATTTGATTACTCTCAAGAAGCCGCCAGATACCATCTTGAGGATGGAGAAATTGACCGTCTATTAATGGAAAAGAACATATCAATGATGGAACCTAATGGTCTTGTTGAAAATGCTATGGAGGCATCTTCATCATTTCAACAAGATTATCTAGCCTTTCAATCATCCAGGGCTGGTGGGTCGGCTAACATGGTGCAGACCATTAACAACAATGCAAATTCTATACTTATGAATCTGAGCTGCAACAAAAACATCAATCTAGGATATCCTCAGCCTCAAGCTCATTCAAGCACATCACATTCGTTATCAACTATTAGTGGTGAAAATAGTGCCCCTGATTATCGAGATTGTGGGTTATCACCCACGTTCCTGACAGGTGAAAGCCGGTGGGAACCAAATTACGAGGCCAAATGCCCAAAAGCAAGGGATAAAGCTAAAATGAGATACCACGAGAAAAAGAAAACTCGGACGTTTTGTAAACAAATAAGATATGCATCTCGCAAAGCAAGAGCTGATACTAGGAAGCGTGTGAAAGGTAGATTTGTGAAAGCTGGTGAAGCATATGATTATGATCCTCAAGAGAAAGGAAACTTCTGA 1272 0.4245 MEPLCDLCGVVRAVVYCKLDSARLCLNCDGYVHSANALSHRHPRSLLCDKCNSQPAIARCMYDKMSLCQSCDRNPNGCSVLGHRHQTLSSYTGCPSSAEISKIWSSVLDAPCPGGPDITGCGSLSTLPKNEQPDYGASFGLVTGKLNEIEACVKYEPWMGQSSNIVPPNPNHLSSGKDHPFFFPLDSDLPKGCPKCKDLGILDGDDLCECLNMDDLQIYFESGDEIFDYSQEAARYHLEDGEIDRLLMEKNISMMEPNGLVENAMEASSSFQQDYLAFQSSRAGGSANMVQTINNNANSILMNLSCNKNINLGYPQPQAHSSTSHSLSTISGENSAPDYRDCGLSPTFLTGESRWEPNYEAKCPKARDKAKMRYHEKKKTRTFCKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPQEKGNF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0502 423 Pfam CCT motif 367 409 IPR010402 GO:0005515
Dere07g0502 423 CDD Bbox1_BBX-like 4 47 - -
Dere07g0502 423 ProSiteProfiles CCT domain profile. 367 409 IPR010402 GO:0005515
Dere07g0502 423 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 412 - -
Dere07g0502 423 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0502 Dere-ChrDere07 8081322 8083329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0502 1 417 C2C2-CO-like Transcription Factor Family AT3G21880 42.417 6.39e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Dere07g0502 CCT 3.3e-16 CL0281