Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0470 ATGAGAAAGATCAGAAGGAAAATGATCCTCAACTGGTCTGCAAATCCCATGCTGCCTATCTTCTTTTTGCACGCATTTTTTATCACTTTTATGCATTGCTCTGCTAGAGATACCATAACCATAAACAACTTCATAAGTGATGAGAAGCAAGATACTCTTATTTCAGCTGGTGAAATCTTTGAACTAGGATTCTTCACTCATAATGGAAACCCTAGTAGTAGAAGATATGTGGGAATATGGTACTACAATTCAAATCCACCAATAGTTGTGTGGGTTGCTAACCGTGACAATCCACTTTCTGATGCCGGGGGTGCTTTTGCCATTTCTGAGGATGGCAATCTCAGGGTTTTGGATGGAAGTGGGAGATCTTACTGGGGTACAAATCTTGAAAGGTCATCTTCAGCACACAGAACAGTGAAGCTAATGGATAGTGGAAATCTTATTGTAAGCGATGAAGAACAAGGAAATCATTCAGTGAAGATTCTCTGGCAGAGTTTTGCAAATCCAACAGATACTTTTCTTCCAGGCATGAAAATGGATGAAAATCTGGTACTAACTTCATGGACCAGTTATGATGACCCAGCACCAGGGAACTTCTCATTTCGCCTAGATCAAGGAGAGAACCAATATATCATATGGAAAAGATCTATTAGGTACTGGAAAAGCAGCGTGACAGGTACATTTTATGGATCAGGTGAAATGTCTTCTGCAATATCTTACTTATTGTCCAATTTCACCCTGAGAATATCCCCAAACAATTCTGTACCCTTTCTCACTTCATCACTGTATGGTGACACAAGGCTGGTTATGACATACTCGGGTCAGCTTCAGTATATGAAGATGGATTCACAGAAAGTTTGGTCTTTAGTTTGGGCAGAGCCCCGAGATAGATGCAGCGTGTATAATGCTTGTGGTAACTTTGGCAGCTGCAATAGTAAGTATGATTCTATGTGCAAGTGTTTACCCGGTTTCAAGCCTAACTCTCAAGAAAGTTGGAATGCTGGTGACTTTTCAAGTGGATGCAGCAGGAAAACAACTGTGTGCAGTGAGAACGCTGAGAGTGACACGTTTTTGAGTTTAAAAATGATGAAAGTAGGGAACCCCGATGCTCAATTTAATGCTAAGAATGAAATGGAATGCAAGTTAGAGTGCCTTAACAATTGCCAATGCTATGCATATTCATATGAAGATCCTAAAATCATAAGGCGGGCTACTAGTGGTGATGCAGTGTGCTGGATTTGGTCTGAAGACTTGAACAATCTTGAAGAGGAGTATGAGAATGGCTGTGATCTCCATGTACGTGTTGCATTTTCTGATATAGAATCCACTGGCAGGGCATGTGGGACTTGTGGTACAAATTTTATTCCATATCCACTTAGCACAGGACCATATTGTGGCGACCCCATGTACTTCAGTTTTCGCTGTAACATTACCACAGGAGAGCTAAACTTTGAAACACCTGGGGGCACTTATCAAGTGATAAGCATATCCCCTGAAACACAAAAATTCATGATCCACAGCAAAGAGATGGTTGGTTGTGAGGGTCAAAGTTCAAGGGAGAAGCTTCTGCGTCTTAACCAGTCATCTCCAATTCATCTTACTGGCAATTGCAATGCTGACCCAAGAACCTTAAATCCTATTGCTCCCGTGAAACTTGGTGAGGAAATAGAATTGAGCTGGGATCCACCATTAGAGCCAGTTTGTTCTTCTTCTTCTGACTGCAAGGACTGGCCAAATTCAATTTGCAATACTACCAGAGATGGGATAAAGAGGTGCCTTTGCAATACAAACTTTGTTTGGGATGGCTTGAATTTAAATTGTACCATAGAAGGCAGTCATAGCTATCAAACAAGCAGGCGTTTGTCCTTTCCTCTGATCATTGCAGTCACTTTCACTACTTTGATTGCGTTAATTCTTCTATCAAGTACTGTTACCTATGTTTACTTTTGGAGGAGGAGGCTAGCGAAGGCACAAGAAATCAGGGGATATGTTCAGAAAAATTCAGCCATTAACTTGTATGACAGTGAGAGATATGTCAAAGATTTGATTGAATCGGGTAGGTTCAAAGAAGATGATGGACAGGCCATAGATATCCCACATTTTCATTTGGAAAGCATACTTAATGCTACTAATAACTTTTCAAATGCAAAGAAGCTTGGACAAGGGGGGTTTGGTCCTGTCTACAAGGGAAAGTTTCCAGGAGGACAAGAGATAGCAGTAAAAAGACTCTCAAGTTGCTCTGGACAAGGTTTAGAAGAGTTCAAAAATGAAGTTGTGTTGATTGCCAAGCTTCAACATCGGAACCTGGTTAGGCTACTGGGTTATTGTGTTGAAGGAGATGAAAAGATGTTAGTGTATGAATATATGCCAAATAGAAGTTTAGATTCTTTCATATTTGACCGGAAGTCATGTGCTTTATTGGATTGGGACATGCGCTTCAAGATTATTTTAGGGATTGCTCGAGGGCTCCTTTACCTGCATCAAGACTCAAGGCTGAGAATCATACATAGAGACCTGAAAACAAGCAATATTCTGCTAGATGCAGAGATGAACCCTAAAATCTCAGACTTTGGCCTGGCTAGGATCTTTGGGGGAAAAGAAACAGCAGCCAACACAAACAGGGTGGTTGGAACTTATGGTTATATGTCTCCAGAGTATGCATTAGATGGATTTTTTTCAGTCAAGTCTGATGTGTTTAGCTTTGGTGTGGTGGTACTTGAGATTCTTAGTGGAAAAAGGAACACAGGATTTTACCAGTCAGATCATGAATTGAGTCTTCTAGGCTATGCATGGCATTTATGGAAAGTAGACAGGGCACTGGATTTTATGGATCAGACACTATCTCAATCATGCAAGGCAGATGAATATTTGAAGTGTATAAATGTCGGACTGTTATGTGTACAAGAAGATCCAAATGATCGTCCCATCATGTCGAACGTAGTTTTCATGCTTGGAAGTGATTCCAGCACTCTTCCTACTCCCAAACAGCCAGCCTTTGTTGTTAGGAGATGCCCTTCTAGCAGGGCTTCTTCTTCCAGTAAACTGGAATCTTGTTCGCATAATGAATTGACTGTCACTCTAGAAAACGGCAGGTATATTACGAAAAGTCTCAAACAAGTTGCCCTTCAAGGTTTTGACCCATTTTATGCCCTTGCCTACAAGGCTGTAACTACACTGGCTTCTACAGCGTCAACAATGGCGGGGATTGGGTTCAAAGATTTGCTGCCTGTGATGGCTAGCAAGCTGGGAGGTGAAGGTCTGATGAAGGAGCTGTGCAATGGGTTTGAACTGCTGATGGATAAAGACAAAGGGGTCATCACTTTGGATAGCTTGAGAAGCAACTCGGCTCTTCTGGGTCTTGAGGACTTGAAGGAGGACGAGCTTGTGGGCATGATGAAGGAAGGAGATCTCGACGGCGATGGAGCTCTCAGTCAGATGGAGTTCTGCGTTTTGATGTTCAGATTAAGCCCAGACTTGATGAATAGCTCCTGGTTTTGGCTCCAGGAAGCTCTTCAAGATGATCTCAATAACTTGAATTCCATTTGA 3546 0.4174 MRKIRRKMILNWSANPMLPIFFLHAFFITFMHCSARDTITINNFISDEKQDTLISAGEIFELGFFTHNGNPSSRRYVGIWYYNSNPPIVVWVANRDNPLSDAGGAFAISEDGNLRVLDGSGRSYWGTNLERSSSAHRTVKLMDSGNLIVSDEEQGNHSVKILWQSFANPTDTFLPGMKMDENLVLTSWTSYDDPAPGNFSFRLDQGENQYIIWKRSIRYWKSSVTGTFYGSGEMSSAISYLLSNFTLRISPNNSVPFLTSSLYGDTRLVMTYSGQLQYMKMDSQKVWSLVWAEPRDRCSVYNACGNFGSCNSKYDSMCKCLPGFKPNSQESWNAGDFSSGCSRKTTVCSENAESDTFLSLKMMKVGNPDAQFNAKNEMECKLECLNNCQCYAYSYEDPKIIRRATSGDAVCWIWSEDLNNLEEEYENGCDLHVRVAFSDIESTGRACGTCGTNFIPYPLSTGPYCGDPMYFSFRCNITTGELNFETPGGTYQVISISPETQKFMIHSKEMVGCEGQSSREKLLRLNQSSPIHLTGNCNADPRTLNPIAPVKLGEEIELSWDPPLEPVCSSSSDCKDWPNSICNTTRDGIKRCLCNTNFVWDGLNLNCTIEGSHSYQTSRRLSFPLIIAVTFTTLIALILLSSTVTYVYFWRRRLAKAQEIRGYVQKNSAINLYDSERYVKDLIESGRFKEDDGQAIDIPHFHLESILNATNNFSNAKKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDSFIFDRKSCALLDWDMRFKIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDAEMNPKISDFGLARIFGGKETAANTNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEILSGKRNTGFYQSDHELSLLGYAWHLWKVDRALDFMDQTLSQSCKADEYLKCINVGLLCVQEDPNDRPIMSNVVFMLGSDSSTLPTPKQPAFVVRRCPSSRASSSSKLESCSHNELTVTLENGRYITKSLKQVALQGFDPFYALAYKAVTTLASTASTMAGIGFKDLLPVMASKLGGEGLMKELCNGFELLMDKDKGVITLDSLRSNSALLGLEDLKEDELVGMMKEGDLDGDGALSQMEFCVLMFRLSPDLMNSSWFWLQEALQDDLNNLNSI 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0470 1181 CDD B_lectin 42 169 IPR001480 -
Dere07g0470 1181 Pfam S-locus glycoprotein domain 226 327 IPR000858 GO:0048544
Dere07g0470 1181 ProSiteProfiles EF-hand calcium-binding domain profile. 1123 1158 IPR002048 GO:0005509
Dere07g0470 1181 ProSiteProfiles Protein kinase domain profile. 713 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0470 1181 SMART serkin_6 713 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0470 1181 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 678 788 - -
Dere07g0470 1181 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 789 992 - -
Dere07g0470 1181 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 31 166 - -
Dere07g0470 1181 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Dere07g0470 1181 CDD PAN_AP_plant 348 436 - -
Dere07g0470 1181 Gene3D - 31 168 IPR036426 -
Dere07g0470 1181 SUPERFAMILY Protein kinase-like (PK-like) 696 984 IPR011009 -
Dere07g0470 1181 Pfam D-mannose binding lectin 89 183 IPR001480 -
Dere07g0470 1181 CDD EFh 1098 1152 IPR002048 GO:0005509
Dere07g0470 1181 Pfam Domain of unknown function (DUF3403) 986 1031 IPR021820 GO:0004674
Dere07g0470 1181 SMART ntp_6 352 435 IPR003609 -
Dere07g0470 1181 ProSiteProfiles EGF-like domain profile. 294 330 IPR000742 -
Dere07g0470 1181 Gene3D Transferase(Phosphotransferase) domain 1 789 993 - -
Dere07g0470 1181 ProSitePatterns EF-hand calcium-binding domain. 1136 1148 IPR018247 -
Dere07g0470 1181 Pfam Protein tyrosine and serine/threonine kinase 716 982 IPR001245 GO:0004672|GO:0006468
Dere07g0470 1181 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 971 - -
Dere07g0470 1181 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 194 IPR036426 -
Dere07g0470 1181 Pfam EF-hand domain pair 1103 1154 IPR002048 GO:0005509
Dere07g0470 1181 CDD STKc_IRAK 719 984 - -
Dere07g0470 1181 SMART blect_4 42 169 IPR001480 -
Dere07g0470 1181 ProSiteProfiles Bulb-type lectin domain profile. 38 162 IPR001480 -
Dere07g0470 1181 ProSiteProfiles PAN/Apple domain profile. 348 429 IPR003609 -
Dere07g0470 1181 SUPERFAMILY EF-hand 1069 1152 IPR011992 -
Dere07g0470 1181 Pfam PAN-like domain 351 420 IPR003609 -
Dere07g0470 1181 Gene3D - 1069 1180 - -
Dere07g0470 1181 Gene3D Phosphorylase Kinase; domain 1 680 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0470 Dere-ChrDere07 7684456 7693977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0470 692 1002 Receptor kinase-like Gene Family AT4G23230 60.703 3.96e-126 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g0470 PK_Tyr_Ser-Thr 9.2e-46 CL0016