Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0469 ATGATAACTGTTGCTCTGCTACATGCTTGCTTAGTAATTCTATGTCTTCCTCAGCTCTGTTTAGCCGGGGATACTTTGAAGATTGGTGAAAAGCTAACGGACAGTGAAAGTGCCAACCTTGTTTCAAGAGGAGGGCAGTTTGAACTGGGCTTCTTCTTCCCTCCTGGAAGCTCAGAGAAATATCTAGGAATATGGTACCATAGGTTAGAACCTCAAACAGTTGTCTGGGTTGCTAACAGAGACAACCCTGTCCTTGGTTCAACTGGAATTTTTCAAATTACCGAAGATGGAAATCTCATGGTAGCAGATACAACGGGAACACGCTATTGGTCTTCGGAACTTAAAGAAGCATCTTCTCCCACAAACCGGACAGTGAAGCTCTTGGATTCTGGAAACTTACTTCTAAGAGACGATCGATTTGCAGTGATCCTCTGGCAAAGCTTCGAACACCCTACGGACACGTTTCTTGTGGACATGAAGATGGATAAAGATTTAATCTTGACTTCATGGAAATCCTCTGGGGATCCACGGAGTGGAACTTTCACATTTAAGATGGTAGAAACAGGGGATGATGTCTATAGAATTTACAAAAACCAGCACCAAATTTACTGGGAAGGTGAAACAGTAGCAGATTTTGGCTCAGAAGAACTGTCTCCTATGATACTTTCCTTGTTGACAAACTTCACACTAAAACCAATAAGCTACAAAAACAAAAGCCTCTCAATGATTCCTCGTCGTTTGGATTACGGGATTACAAGGCTAGTGATGAATTCTACAGGGGAGATACAGTTTCTGAAATGGGATAATCTCGAAGGATGGTCCTTGCGATGGCGGGAGCCAGCTAATGATTGCAAGATTTATAATTTCTGTGGCAACTTTAGCAGCTGCAATATCAACAATAGCCCGAACTGCAAATGTTTGCCAGGATTCATTCGTAGGTCGCAGGAGGAAAAACAGCCCTCTGTCGTTGGAGAATTCGTCCCCGATTGTTCCAGAGAAACTACATCATGCGGAGAAAACACGACAACATTCATAGACTTGAAGATGAAGAAAGTGAGAAACCCAAACAATCCAGTCATCGCAGCAAACGAAAACGAGTGCCGATCTGAATGCCTTAGTAGGTGTCCCCATTGCCAGGCTTATTCATATGATGCATCAAGAAGTGTTGATCGTAGCAGCTCCCTCACATGCTTCATCTGGACTTCCGTTTTACCAACTATTGAAGAAGCGTCCCTTGATCATGGCACTAATCTTTCTGTCCTGGTATATATACCAGATATAGAATCAACTCCAAGAACGTGTAAACCTTGCGGTACAGACACAATTCCTTATCCGCTGAGCACTGAGCCAAGTTGTGGAGATCCCATTTACCATAATTTCAGCTGCGACAGGACAGGGAAGGTTACCTTCATGGTGGGAAATATAAGTTATACAGTTACTGATATTGATCCACCTTCGAGAACGTTCTCCATCCATATCGAGGATTCGTCTTATTGTGATGGTAGCAATCATAGGATCCAGCTTACTCCGCCATATAATGTGACTCGACTGTGCTATGGTGAAGACGAATTACAGATTAGTTGGTTGCCTCCACCAGAACCACCTTGTACAAAGTCCATAGACTGTAAGAATTGGTCTCATTCAACTTGCAACGCAACCAGAAATGGAATTGGAAGATGCCTCTGCGATAAAAACTATCGATGGAATGGCTTGGATTTTAATTGTACTCTAGGAAAAAACAGCTCTCAGACCCCACTCCCTTTGATATTAGGGGTAACATTCTCAAGTACGATTTTCCTGGCCTGCATTATAACTTCTGCTTATTATTGGAGAAGAAAAATAGCCCATAAGCAAGAAATGGGAAGAATCCAGAGAATGAGAGAGGGTTTGTATGACAGTGAGAGATATGTCAAAGATTTGATAGACGCTGGGGATTTAGAGGAAAAAGACAATGAAGGGATAGAGGTACCCTATTTTGATTTTGATAGCATACTATTAGCTACAAATAACTTCTCAGATGCGAACAAGCTTGGACGTGGAGGTTATGGGCCTGTCTACAAGGGCAAGCTTCCAGGAGGTCAAGACATTGCAGTGAAGAGACTTTCAAATGTTTCATCACAAGGCTTAAAGGAATTCAAGAATGAGGTTGTTTTGATATCCAAACTTCAACATCGAAATCTTGTCAGACTTCGAGGCTATTGCATAAGAGGAGAGGAAAAAATCTTAATTTATGAATTCATGCCAAACAAGAGCTTAGATGCATTCATATTCGATCGTGCACAAGGGGTGATTTTAGATTGGCAAATGCGATTTGATATAATCTTAGGAATTGCTCGAGGGATCTTATATCTTCACCAAGACTCCAGATTAAGAGTGGTTCACAGGGATTTGAAAACCAGCAACATTCTTTTAGATGAACAGATGCAACCAAAAATTTCAGACTTTGGATTGGCAAGAATATTTGGAGGCAAAGAGACTGAAGCCAACACTGAACGAGTAGTTGGAACTTATGGATATATGTCTCCAGAATATGCATTGGATGGGTTATTCTCGATCAAATCAGACGTTTTTAGCTTTGGTGTAGTGGTGCTCGAAATTATTAGTGGAAAGAAGAACTCGGGGTTCTTCCGGTCCAAGCAATTTTCCAGCATGTTGGGTTATGCATGGAGGCTATGGACAGAGAACAAGCTGGTGGATTTAATGGACCAATCTATGAGTGAAAGTTGCAATGTAAATCAATTCGTGAGGTGTGCACAGATTGGCCTCTTGTGCGTACAAGACGAACCAGGAGAAAGGCCCACCATGTCACAAGTAGTGGTGATGCTTGAAAGCGACACCGCAAGTCTCCCAACTCCAAAACAACCAACCTTTTTCATGAACAGAGGCCTTTCCGGCACAGCTTCTTCCAGTAAACCTGAAGGAATTCTGCCCACTGAGACTACCCACCAGGAAGGTCGATAG 2961 0.4238 MITVALLHACLVILCLPQLCLAGDTLKIGEKLTDSESANLVSRGGQFELGFFFPPGSSEKYLGIWYHRLEPQTVVWVANRDNPVLGSTGIFQITEDGNLMVADTTGTRYWSSELKEASSPTNRTVKLLDSGNLLLRDDRFAVILWQSFEHPTDTFLVDMKMDKDLILTSWKSSGDPRSGTFTFKMVETGDDVYRIYKNQHQIYWEGETVADFGSEELSPMILSLLTNFTLKPISYKNKSLSMIPRRLDYGITRLVMNSTGEIQFLKWDNLEGWSLRWREPANDCKIYNFCGNFSSCNINNSPNCKCLPGFIRRSQEEKQPSVVGEFVPDCSRETTSCGENTTTFIDLKMKKVRNPNNPVIAANENECRSECLSRCPHCQAYSYDASRSVDRSSSLTCFIWTSVLPTIEEASLDHGTNLSVLVYIPDIESTPRTCKPCGTDTIPYPLSTEPSCGDPIYHNFSCDRTGKVTFMVGNISYTVTDIDPPSRTFSIHIEDSSYCDGSNHRIQLTPPYNVTRLCYGEDELQISWLPPPEPPCTKSIDCKNWSHSTCNATRNGIGRCLCDKNYRWNGLDFNCTLGKNSSQTPLPLILGVTFSSTIFLACIITSAYYWRRKIAHKQEMGRIQRMREGLYDSERYVKDLIDAGDLEEKDNEGIEVPYFDFDSILLATNNFSDANKLGRGGYGPVYKGKLPGGQDIAVKRLSNVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCIRGEEKILIYEFMPNKSLDAFIFDRAQGVILDWQMRFDIILGIARGILYLHQDSRLRVVHRDLKTSNILLDEQMQPKISDFGLARIFGGKETEANTERVVGTYGYMSPEYALDGLFSIKSDVFSFGVVVLEIISGKKNSGFFRSKQFSSMLGYAWRLWTENKLVDLMDQSMSESCNVNQFVRCAQIGLLCVQDEPGERPTMSQVVVMLESDTASLPTPKQPTFFMNRGLSGTASSSKPEGILPTETTHQEGR 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0469 986 Gene3D - 19 149 IPR036426 -
Dere07g0469 986 ProSiteProfiles Bulb-type lectin domain profile. 23 148 IPR001480 -
Dere07g0469 986 Pfam Protein tyrosine and serine/threonine kinase 675 941 IPR001245 GO:0004672|GO:0006468
Dere07g0469 986 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 747 950 - -
Dere07g0469 986 MobiDBLite consensus disorder prediction 960 986 - -
Dere07g0469 986 SUPERFAMILY Protein kinase-like (PK-like) 653 961 IPR011009 -
Dere07g0469 986 CDD STKc_IRAK 677 943 - -
Dere07g0469 986 CDD B_lectin 40 151 IPR001480 -
Dere07g0469 986 FunFam Receptor-like serine/threonine-protein kinase SD1-8 18 148 - -
Dere07g0469 986 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 176 IPR036426 -
Dere07g0469 986 SMART blect_4 31 151 IPR001480 -
Dere07g0469 986 SMART serkin_6 671 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0469 986 Gene3D Phosphorylase Kinase; domain 1 641 746 - -
Dere07g0469 986 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 636 746 - -
Dere07g0469 986 Gene3D Transferase(Phosphotransferase) domain 1 747 952 - -
Dere07g0469 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Dere07g0469 986 ProSiteProfiles PAN/Apple domain profile. 337 423 IPR003609 -
Dere07g0469 986 Pfam D-mannose binding lectin 73 164 IPR001480 -
Dere07g0469 986 MobiDBLite consensus disorder prediction 960 977 - -
Dere07g0469 986 Pfam PAN-like domain 337 403 IPR003609 -
Dere07g0469 986 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 124 966 - -
Dere07g0469 986 Pfam S-locus glycoprotein domain 247 312 IPR000858 GO:0048544
Dere07g0469 986 CDD EGF_CA 282 314 - -
Dere07g0469 986 ProSiteProfiles Protein kinase domain profile. 671 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0469 Dere-ChrDere07 7674588 7678384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0469 643 959 Receptor kinase-like Gene Family AT4G05200 56.875 4.70e-127 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g0469 PK_Tyr_Ser-Thr 5.4e-46 CL0016