Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0468 ATGGGAATTGTTGCAGTTGTTCTCTTCTCCTTCGGTGGCTGGTTGTTATGCTTTTCTCAACTACATTTGGCTGCACATACTTTGAAGGCAGGCGAAAAGATCGCTGGCAATCAAACCCTTGTTTCAATTGAAAACATATTTGAACTGGGCTTCTTTTCCCCTCCAGAAAGTACGAGAAGGTACTTAGGAATATGGTATTACGGGTTACAAACCCGAACAGTCGTGTGGGTTGCAAACAGAGACCTGCCTGTTCCAGACTCCACAGCAATTTTCCATATTGCAGAGGATGGAAACCTCGTAGTATCAGACACCCATGGATATCAATACTGGTCTTCCAGCCTCGAAGCGTTTTCGTCCTTAAACCGGACAGTGATGCTCATGGATTCGGGGAACCTGGTATTACGAGAAAACCAGCTGATAAATAATCTCTGGCAGAGCTTTGAGCATCCAACGGATACATTTCTGCCGTTCATGAAGATGGAAAACATAACATTAACTTCTTGGACTAGCTCTGAGAACCCAGCATCTGGGAACTTCACATGCCAGCTTACTCAAACAGGGAACAGCAGCTATGTACACTTGAACAAGCTAGACCAACTTCACTGGGAAGGAAGCATACCCCCGGCAATATCGGACTGGTTCACAAACCCGACGAGGAATAACTTTAAGGGGAATTCTCCGAACCCGCAACTGGATTATAACCGTACGAGGGTAGTTTTGAATTCTACAGGGCACATCGAAGTTCAGAGTTACTATTATAATCTCGAAGGTGAATGGTCAACGCGGTGGAAAGAACCATCTGACCGGTGCCAGATACATAATGCTTGTGGGAGCTTTAGCAGCTGCAATGTTAAGAATCTCCCTATCTGCAAGTGTTTGCCTGGATTTGATCCTATGTCGCGAGGGAGTGTGTCTTCCGGAGAACTGTTCGATGGGTGCGTCAGAAAATCAGCGTCATGTGAAAGTAAAGACGTTACATTCTTAAACCTAACGATGGTAAAAGTGGGAAGCTCGACCTTGCAAGTCCCAGCAGAAACTGAAGCAGAATGCCAATCTAAATGCGTTAAAATGTGCTCTTGCCAGGCTTATTCGTATGACGCTAAATGGTCGGATCGGGGTCCCGTGCCTTGCAGCATCTGGACTAAAGATTTACTCACTCTTCAAGAAAATTCCCCTAAAAATGGCATTCAACTTTCTGTCCGCGTACTCATTTCAGACATAGCATCTACTGCTAAAACCTGTAAACCTTGCGGCACAACATTAATTCCATATCCACTAAGCACTGGGCCAGATTGTGGAGATCCCATGTACTTCAAGTTAACTTGCGACAGCTCAACAGGCGAGGTTAGCTTCTCGATGCTTAGACGTAGTCGAGTAGCTAAAATCGATCCAGGCAGTCGGAAGTTGATTATCCAAATTGAAGATTCATACTATTGCGATGACAAGGATCGACACCAGCTTGATTTACCATTCAATGTAACCAACTGGTGCTATAGTGAAGATGCAATAGAGGTTAGCTGGCTACCACCATCGGAACCTCTCTGTAATAACTCCGCAGACTGCAACGATTGGCCCCATTCAACCTGCAACAATGCTACAAAAGATGGAAAACCAAGGTGCCTTTGTGATACAAACTACTACTGGAACAACTCAAATTTAAATTGCACTCAAGGTCATCCCTCTTTCTGGTTACAAGAGCCATCTGGAAGAAAAAAACCACGGACTTTATTTCTTGCGATAACTCTTTCATGCGTGGCTTTCGTGGCATGCATGGTTGTCTTGGCTTACTTATGGAGAAGGAAAATAGCGCACAAGAAAGACAGAGAAAGAGTTCAGAGAACTCGAGGGCGCTTGTATGATAGTGAAAGACATGTGAAAGATTTGATAAACTTGGAAGAACTAGAAGAAAAAGACAATGAAGGCATACAGGTACCATATTATGACTTTGAAAGCATACTAGCCGCAACGGATAGCTTTTCTGACGCAAACAAGCTGGGACGAGGAGGTTATGGCCCTGTTTATAAGGGTACATTAGGAGGGCATCATATCGCAGTCAAAAGGCTTTCAAGTGTTTCATCGCAAGGCCTAAAGGAATTTAAGAATGAGGTTGTTTTGATATCCAAACTTCAACATCGAAACCTTGTCAGACTTCGGGGTTATTGCATAAAAGGAGATGAGAAAATCTTACTCTATGAATATATGCCAAACAAGAGTTTAGACACATTTTTATTCGATCCTGCACGAGGTGTAATTTTGGATTGGCAAATGCGATTTGACATAATTTTAGGAATTGCCCGAGGAATGCTATACCTTCACCAAGACTCTAGATTGAGAGTAATTCATAGAGATTTGAAAACTAGCAATATCCTTTTAAATGAAGAGATGCAACCAAAAATTTCAGATTTTGGATTGGCTAGAATATTTGGAGGCAAAGAGACCGAGGCCAACACTGAGAGAGTAGTTGGAACTTATGGATATATGGCTCCTGAGTATGCACTAGATGGACAATTCTCAATCAAATCAGACGTTTTCAGTTTTGGTGTAATGGTTCTTGAGATTATAAGTGGAAAAAAGAACACAGGATTCTTTCAGTCCAAACAAATATCCAGTCTTTTGGGTTATGCGTGGAGGCTGTGGACAGAGAATAAGCTATTGGATTTAATGGACCAATCATTGAGTGAAAGTTGCGATGCAAATCAATTCATTCGGTGTGCCGACCTTAGTCTCTTGTGCGTCCAAGATGAACCAGGAGACAGGCCTACCATGTCACAAGTAGTGAGAATGCTTGAAAGCGAAATTGGAAGCCTCCCAAATCCTAAACAACCAACCTTTTTTATGACCAGAGGCCTTCCTAGCACTGCTTCTTCTTCTAGTAAACCTGAAACAATTCTGCCAACTGAGAGTTCCTATCAGGAAGGTCGATAG 2925 0.4291 MGIVAVVLFSFGGWLLCFSQLHLAAHTLKAGEKIAGNQTLVSIENIFELGFFSPPESTRRYLGIWYYGLQTRTVVWVANRDLPVPDSTAIFHIAEDGNLVVSDTHGYQYWSSSLEAFSSLNRTVMLMDSGNLVLRENQLINNLWQSFEHPTDTFLPFMKMENITLTSWTSSENPASGNFTCQLTQTGNSSYVHLNKLDQLHWEGSIPPAISDWFTNPTRNNFKGNSPNPQLDYNRTRVVLNSTGHIEVQSYYYNLEGEWSTRWKEPSDRCQIHNACGSFSSCNVKNLPICKCLPGFDPMSRGSVSSGELFDGCVRKSASCESKDVTFLNLTMVKVGSSTLQVPAETEAECQSKCVKMCSCQAYSYDAKWSDRGPVPCSIWTKDLLTLQENSPKNGIQLSVRVLISDIASTAKTCKPCGTTLIPYPLSTGPDCGDPMYFKLTCDSSTGEVSFSMLRRSRVAKIDPGSRKLIIQIEDSYYCDDKDRHQLDLPFNVTNWCYSEDAIEVSWLPPSEPLCNNSADCNDWPHSTCNNATKDGKPRCLCDTNYYWNNSNLNCTQGHPSFWLQEPSGRKKPRTLFLAITLSCVAFVACMVVLAYLWRRKIAHKKDRERVQRTRGRLYDSERHVKDLINLEELEEKDNEGIQVPYYDFESILAATDSFSDANKLGRGGYGPVYKGTLGGHHIAVKRLSSVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDTFLFDPARGVILDWQMRFDIILGIARGMLYLHQDSRLRVIHRDLKTSNILLNEEMQPKISDFGLARIFGGKETEANTERVVGTYGYMAPEYALDGQFSIKSDVFSFGVMVLEIISGKKNTGFFQSKQISSLLGYAWRLWTENKLLDLMDQSLSESCDANQFIRCADLSLLCVQDEPGDRPTMSQVVRMLESEIGSLPNPKQPTFFMTRGLPSTASSSSKPETILPTESSYQEGR 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0468 974 SUPERFAMILY Protein kinase-like (PK-like) 641 965 IPR011009 -
Dere07g0468 974 ProSiteProfiles PAN/Apple domain profile. 320 403 IPR003609 -
Dere07g0468 974 ProSiteProfiles Protein kinase domain profile. 659 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0468 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Dere07g0468 974 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 624 733 - -
Dere07g0468 974 Pfam S-locus glycoprotein domain 232 299 IPR000858 GO:0048544
Dere07g0468 974 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 170 IPR036426 -
Dere07g0468 974 SMART ntp_6 322 402 IPR003609 -
Dere07g0468 974 CDD STKc_IRAK 665 930 - -
Dere07g0468 974 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 734 937 - -
Dere07g0468 974 SMART serkin_6 659 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0468 974 Gene3D Transferase(Phosphotransferase) domain 1 734 936 - -
Dere07g0468 974 Pfam PAN-like domain 320 385 IPR003609 -
Dere07g0468 974 Pfam Protein tyrosine and serine/threonine kinase 663 929 IPR001245 GO:0004672|GO:0006468
Dere07g0468 974 SMART blect_4 31 150 IPR001480 -
Dere07g0468 974 FunFam Receptor-like serine/threonine-protein kinase SD1-8 20 147 - -
Dere07g0468 974 Pfam D-mannose binding lectin 73 162 IPR001480 -
Dere07g0468 974 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 115 955 - -
Dere07g0468 974 CDD PAN_AP_plant 319 402 - -
Dere07g0468 974 CDD B_lectin 34 150 IPR001480 -
Dere07g0468 974 Gene3D - 19 148 IPR036426 -
Dere07g0468 974 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Dere07g0468 974 Gene3D Phosphorylase Kinase; domain 1 622 733 - -
Dere07g0468 974 MobiDBLite consensus disorder prediction 937 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0468 Dere-ChrDere07 7654438 7658802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0468 648 946 Receptor kinase-like Gene Family AT4G23140 58.824 3.93e-123 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g0468 PK_Tyr_Ser-Thr 3.7e-47 CL0016