Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0453 ATGGTGAGAACCCCTTGCTGCGACCAAAGTACTGGACTCATGAAAGGCACATGGACACCCGAAGAAGACAGCAAGTTGGTTGCTTATGTTACTAAGTATGGCTGCTGGAATTGGCAACGAGTCCCCAAGTTTGCAGGGCTTAGAAGGTGTGGAAAGAGTTGTAGATTTAGGTGGATGAATTATCTGAGGCCAGACATCAAAAGAGGGAATTACACTCAACAAGAAGACGACAAGATTATCAGACTTCGCCATGAGCTGGGTAGTAGATGGTCTGCGATTGCAGCTTATTTACCAGGAAGAACAGATAATGAAATAAAAAACCGCTGGCACACCAGCCTGAAGAAGCGGTTCCAACAAAACTCAGGCACACCTGGAAAAGCTGAATTCTCTAAGCCCAAGGACCAAACCCTATCTGAATCCAGGCAAGACATCAGAGACTCAGTCACAAGCAGTACTTCTACTGCTCCTACTTCACAGATTGATTCAGTAGTAGTCGATTCCCATGTCTCTAATACATTCCCCATGCCTTCGACAGATGCCGGTGCATCCAGCAGTAAAGAGAATTTGGACATGGGAAATTATGATGACTTGACCATTCTGGATGCATTCATGGAGCCTGCGAGTGAAAATTTTTGGACAGAGCCGTATATGTTTGACAATTCTTATGTCCCTAATAGTAATGAAGCATTGGTACCCTTGTCCCCAGAACATGAATACAGTGCACAGCTTTGGGGACACAATAATTTGCATGACGAATATATTGGCTAA 768 0.444 MVRTPCCDQSTGLMKGTWTPEEDSKLVAYVTKYGCWNWQRVPKFAGLRRCGKSCRFRWMNYLRPDIKRGNYTQQEDDKIIRLRHELGSRWSAIAAYLPGRTDNEIKNRWHTSLKKRFQQNSGTPGKAEFSKPKDQTLSESRQDIRDSVTSSTSTAPTSQIDSVVVDSHVSNTFPMPSTDAGASSSKENLDMGNYDDLTILDAFMEPASENFWTEPYMFDNSYVPNSNEALVPLSPEHEYSAQLWGHNNLHDEYIG 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0453 255 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 201 - -
Dere07g0453 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 66 IPR017930 -
Dere07g0453 255 MobiDBLite consensus disorder prediction 116 163 - -
Dere07g0453 255 MobiDBLite consensus disorder prediction 142 163 - -
Dere07g0453 255 Gene3D - 69 145 - -
Dere07g0453 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Dere07g0453 255 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Dere07g0453 255 Gene3D - 14 67 - -
Dere07g0453 255 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Dere07g0453 255 SMART sant 67 115 IPR001005 -
Dere07g0453 255 SMART sant 14 64 IPR001005 -
Dere07g0453 255 FunFam MYB-related transcription factor 14 67 - -
Dere07g0453 255 CDD SANT 70 113 IPR001005 -
Dere07g0453 255 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Dere07g0453 255 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Dere07g0453 255 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Dere07g0453 255 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0453 Dere-ChrDere07 7329394 7330596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0453 1 231 MYB Transcription Factor Family AT2G31180 43.290 1.69e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere07g0453 Myb_DNA-binding 3.4e-14 CL0123