Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0451 ATGGTGAGAGGTCCTTTCTTCGACGAAAATGGAGTTAAGAAAGGTGCATGGAGTGAAGCAGAGGACGAGAGGCTTAAGACCTATATTCTCAACTATGGCCATCCTAACTGGCGACAACTCCCCAAGTTGGCAGGCTTGGCAAGATGCGGGAAGAGTTGCAGGCTTCGTTGGATGAACTACCTGCGACCAAATCTCAGACAGGGGAACTATACTCCACAAGAGGAGGAAATCATCCTCAAACTACACGAACAACATGGAAACAAATGGTCACTGATTGCTAAAAGCCTACCTGGAAGAACCGACAACCATATAAAAAACCATTGGCATAGCCATCTCAAGTGGAGATCGCAGGGGAAGGGGAGAAATAATTCTGAGCCGAGAGCCAAGAAGCCAAGTCATAACAGTACGCAGCATTCAGAATCTGATATTATGAAAGTTGTGAGTGAGTTCAACAATATATTAGAAAGCTCGTCGTTGCAGTGCACAGAAACGACGTCGTCGACCCCAGCGGATCTTGACAACTCTGCTTCCTTGGCATCTATGGATATGGAATCAACCATGAACGGTTCTCCCGAAGAAGATAATAGCGTGGCTTCGTGTGAAGTTAATAGAATTCAAGAATTCAGTGGGGATTTTTGGACGGAACCATTTATATCAGAAAGTACTTACAGTAAATATTACTATCCCAATATTAGCGGCAGAAGGAGTGGAGACCTCTATCCATATGATGGTACACAGTTGTTTTACTAA 750 0.4427 MVRGPFFDENGVKKGAWSEAEDERLKTYILNYGHPNWRQLPKLAGLARCGKSCRLRWMNYLRPNLRQGNYTPQEEEIILKLHEQHGNKWSLIAKSLPGRTDNHIKNHWHSHLKWRSQGKGRNNSEPRAKKPSHNSTQHSESDIMKVVSEFNNILESSSLQCTETTSSTPADLDNSASLASMDMESTMNGSPEEDNSVASCEVNRIQEFSGDFWTEPFISESTYSKYYYPNISGRRSGDLYPYDGTQLFY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0451 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Dere07g0451 249 CDD SANT 69 112 IPR001005 -
Dere07g0451 249 CDD SANT 16 61 IPR001005 -
Dere07g0451 249 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 195 - -
Dere07g0451 249 FunFam MYB-related transcription factor 13 66 - -
Dere07g0451 249 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dere07g0451 249 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Dere07g0451 249 MobiDBLite consensus disorder prediction 109 141 - -
Dere07g0451 249 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dere07g0451 249 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Dere07g0451 249 Gene3D - 7 66 - -
Dere07g0451 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Dere07g0451 249 Gene3D - 69 145 - -
Dere07g0451 249 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dere07g0451 249 MobiDBLite consensus disorder prediction 118 136 - -
Dere07g0451 249 SMART sant 66 114 IPR001005 -
Dere07g0451 249 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0451 Dere-ChrDere07 7301918 7302884 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0451 1 174 MYB Transcription Factor Family AT2G31180 47.701 9.67e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere07g0451 Myb_DNA-binding 4.8e-12 CL0123