Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0450 ATGGTGAGAGGTCCTTACTATGACAAAAATGGATTGAAGAGAGGTGCATGGGGTAAGGAAGAGGACGAAAGATTAAGAGCGTACGTTGAGAAATATGGCCATTCCAATTGGCGTCAACTCCCCAGAAAAGCAGGTTTATCAAGGTGTGGGAAAAGTTGCAGACTTCGCTGGGTAAACTACCTACGGCCAAACGTAAAACGTGGAAATTACACCCAACAAGAAGACGAAATAATCATCAAATTACATGAACAACATGGAAATAAATGGTCTCTGATTGCTGAAAAATTACCTGGGAGAACAGACAACGAGGTTAAGAACCATTGGCATAGCCACCTGAAGAAGCGCTTAGAATTATGCAATCATGAGAAGACTTCTGAATTCAGAGTGGAGCCGAGAGATACTTGTGAAAGAGAGACAACTCAGTATTCAGAATCTGAAAGCCCAATACTTAATGTTGCAGGTGCTCCCTCCTGCAATGTCTTAGAAAGCTCACCGCCCATCTACAATTCATCTTCAAGCTTCGTCTTCACAGAAGAATGCGACGCAAATGCTCTATGGGGAAAATTTGAAGAATTCAGCAATTTTTGGACCCAACCATTTATCTCAGAAAATACATATAGTCAGGAGGATAACTATTATAGTCCCAACGACTATGCAGCAAATGGAGTAGTTATGGACGAATATCCTTCGTATTTCTTTGATAACGTTGAGTTTTTGTGCCAAGTGATGCAAGAATTGTCAGAATATCCTAATAGGGATATATAA 765 0.4052 MVRGPYYDKNGLKRGAWGKEEDERLRAYVEKYGHSNWRQLPRKAGLSRCGKSCRLRWVNYLRPNVKRGNYTQQEDEIIIKLHEQHGNKWSLIAEKLPGRTDNEVKNHWHSHLKKRLELCNHEKTSEFRVEPRDTCERETTQYSESESPILNVAGAPSCNVLESSPPIYNSSSSFVFTEECDANALWGKFEEFSNFWTQPFISENTYSQEDNYYSPNDYAANGVVMDEYPSYFFDNVEFLCQVMQELSEYPNRDI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0450 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Dere07g0450 254 CDD SANT 69 112 IPR001005 -
Dere07g0450 254 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dere07g0450 254 FunFam Transcription factor RAX3 7 67 - -
Dere07g0450 254 CDD SANT 16 61 IPR001005 -
Dere07g0450 254 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Dere07g0450 254 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dere07g0450 254 Gene3D - 14 66 - -
Dere07g0450 254 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Dere07g0450 254 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 175 - -
Dere07g0450 254 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dere07g0450 254 Gene3D - 69 142 - -
Dere07g0450 254 SMART sant 66 114 IPR001005 -
Dere07g0450 254 SMART sant 13 63 IPR001005 -
Dere07g0450 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0450 Dere-ChrDere07 7297317 7298912 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0450 1 116 MYB Transcription Factor Family AT2G31180 67.241 9.64e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere07g0450 Myb_DNA-binding 4.3e-14 CL0123