Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0445 ATGGGAAGAGCACCTTGCTGCGACAAAAATGGTCTCAAGAAAGGTCCCTGGACGCCTGAGGAAGACACTAAGCTTATCAACTACATTCAGACTCATGGACCAGGCAACTGGCGAACCCTCCCCAAGAATGCTGGTCTTGAAAGATGTGGCAAGAGCTGCCGACTTCGATGGACTAATTACCTCAGGCCGGACATCAAGAGAGGAAGATTTTCCTTCGAAGAAGAAGAGACCATTATTCAGCTGCACAGTATAATGGGAAACAAATGGTCGGCTATAGCAGCTCGATTGCCAGGAAGAACTGACAATGAGATAAAGAACTACTGGAACACCCATATACGAAAAAGGCTGCTTCGAATGGGAATTGACCCTGTGACTCACACCCCACGACTTGATCTTTTTGACGTATCCTCCGTTCTGGCGTCGTTGTTGGGAAACCCATCGCTTTTGAATCTGCAAAGCTTACTGGGTGCTCAGGCCTTGATGAACCCCGAATTCTTAAAGATGGCCACCACTCTGTTATCTTTGAAGAACGAAAACCCAGAATTGGTTTCGCAGAATCTACAACAAATAATCCAAACAGGGAATTCTCAAGTTCAAGAACAAACCCAGATGGATCCTTCACAAATACAATTCAGAAATCAGTTTCAGATGCCGATTGAAACCACCAACGTGGGAGGGTTCTCGGGGGATATGACAAACATGGGATTTTCAGACTCCCAGGGGAATTCAAATCCATCCTACATGGCTGAGAACCTTCTGTTGCAACAAAACCAAGTTGGATTTCATGGAGACTCGAGGTTCATGCAAAAAGTGGGCTACGACTCTGTTCTGTCGACGCCTTCATCGAGTACAACCCCATTGAACTCTTCATCGACATATGTGCATAGCAGTGGGGAGGATGAGAGAGATAGCTACTGCAGCAACTTGTTCAAGTTCGAAATTCCAGAGAGTCTAGACATAAATGACTTTTTGTAA 975 0.4554 MGRAPCCDKNGLKKGPWTPEEDTKLINYIQTHGPGNWRTLPKNAGLERCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHTPRLDLFDVSSVLASLLGNPSLLNLQSLLGAQALMNPEFLKMATTLLSLKNENPELVSQNLQQIIQTGNSQVQEQTQMDPSQIQFRNQFQMPIETTNVGGFSGDMTNMGFSDSQGNSNPSYMAENLLLQQNQVGFHGDSRFMQKVGYDSVLSTPSSSTTPLNSSSTYVHSSGEDERDSYCSNLFKFEIPESLDINDFL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0445 324 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Dere07g0445 324 CDD SANT 69 112 IPR001005 -
Dere07g0445 324 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dere07g0445 324 CDD SANT 16 61 IPR001005 -
Dere07g0445 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Dere07g0445 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 251 - -
Dere07g0445 324 Gene3D - 13 66 - -
Dere07g0445 324 FunFam Transcription factor MYB39 69 130 - -
Dere07g0445 324 MobiDBLite consensus disorder prediction 278 295 - -
Dere07g0445 324 MobiDBLite consensus disorder prediction 278 300 - -
Dere07g0445 324 FunFam MYB-related transcription factor 13 66 - -
Dere07g0445 324 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dere07g0445 324 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Dere07g0445 324 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dere07g0445 324 SMART sant 13 63 IPR001005 -
Dere07g0445 324 SMART sant 66 114 IPR001005 -
Dere07g0445 324 Gene3D - 69 116 - -
Dere07g0445 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0445 Dere-ChrDere07 7244773 7245923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0445 1 324 MYB Transcription Factor Family AT4G21440 53.482 1.46e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere07g0445 Myb_DNA-binding 3.3e-15 CL0123