Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0426 ATGCGTTGGTCTTCTTTCTACCAGACAGCCTCAAGGGCTTTTCATGAGTCTCCCTCCTGGTCCAAGATTCTGGTCGTCTGCACTGTCAGTGGTGGAGGCTTAGTGGCATATGCTGATGCGAGAGCAGTTCACAGTGAGAATGGGGGTAATAAGTGCCCAAAGAAGAAGGTGGTGGTGGTTGGAACTGGGTGGGCTGGGACCAGTTTTCTGAAGAATTTGAAAAACCCTTCTTTTGATGTTGAAGTGGTTTCACCTCGAAATTATTTTGCATTTACCCCTCTGCTACCAAGTGTCACGATCGGCACTGTGGAAGCAAGGAGCATTGTCGAACCAATTCGCAATATCATCCGCAAGAAGGACGTAAACATGCAATTCACAGAAGCAGAATGCTATAAGATCGATGCCAAGAATAGGAAAGTGTACTGTCGTTCAAGTCATGACGGAAAAGCTGGCAAACAAGACTTTTCTATTGATTATGACTACCTGGTTTTAGCCATGGGAGCCCGATCTAATACATTCAATACACCAGGTGTTGAGGAGTATACTCACTTCTTGAAGGAAGTGGAGGATGCTCAGAGAATTCGTCGAACAGTGATTGACCTCTTTGAAAGGGCAAGCCTCCCATGTGTATCTGAAGAGGAGAAGAAGAAACTTCTGCATTTTGTAGTAGTGGGTGGTGGTCCAACTGGTGTAGAGTTTGCTGCAGAGCTTTATGACTTTGTCCATCAGGATTTATCTAAATTATACCCTTCTGTCAAAGACTATGTAAAGATCACTCTTCTGGAAGCAGGCGACCATATTTTGAACATGTTTGACAAGAGGATTACTGAATTTGCTGAAACGAAATTCAAAAGAGATGGTATCGATGTGAAACTAGGCTCTATGGTTATTAAAGTGACTGAGAATGAAATCTGTACTAAAGAAAGAGGAACTGGTAAGGTTGTATCTCTACCTTATGGAATGGTAGTTTGGTCTACTGGTATTGGTCCTCGTCCTGAAGTTGTTCAATTTATGAAAGATATTGGTCAGGGTAATAGGCGTGCAATAAGCACTGACGAATGGTTGAGGGTGGAAGGATTTGACAACATCTATGCATTAGGAGATTGTGCCACTGTGAATCAGCGTAGAGTTATGGAAGATATAGCTGTGATATTTAGCAAGGCAGACAAGAACAACACTGGAAAATTAGATCCTGATGAATTTCAAGAGGTTGTCGGAGACATCATTGAGAGGTACCCACAAGTGGCTATTTATTTGAAGAAGAAGCAAATGAGTAACATTGTGGCCTTATTGAAGCAATCTCAAGACAACCCCGCTGTAGTGGACATTGCAACATTCAAATCTGGTCTTTCCGAAGTTGATTCCCAGATGAAAAATCTTCCTGCTACAGCTCAGGTAGCTGCTCAACAAGGTGAGTATCTTGCAAACTGTTTCAATCGCATAGAGGAGTGTGAGAAATATCCTGAAGGCCCTCTCAGGTTCAGGGGAACAGGACGTCACCGCTTTCATCCCTTTAGGTACAAGCATTTTGGGCAATTTGCTCCTTTAGGCGGAGAACAAGCTGCAGCTCAGCTTCCTGGAGATTGGGTTTCAATTGGGCATAGCACCCAGTGGCTTTGGTACTCTGTATATGCAAGCAAGCAAGTCAGCTGGCGAACGAGGTTTTTGGTGGTGTCTGACTGGGGAAGGCGAGTCGTATTTGGCAGGGACTCGAGTCGAATCTGA 1725 0.4406 MRWSSFYQTASRAFHESPSWSKILVVCTVSGGGLVAYADARAVHSENGGNKCPKKKVVVVGTGWAGTSFLKNLKNPSFDVEVVSPRNYFAFTPLLPSVTIGTVEARSIVEPIRNIIRKKDVNMQFTEAECYKIDAKNRKVYCRSSHDGKAGKQDFSIDYDYLVLAMGARSNTFNTPGVEEYTHFLKEVEDAQRIRRTVIDLFERASLPCVSEEEKKKLLHFVVVGGGPTGVEFAAELYDFVHQDLSKLYPSVKDYVKITLLEAGDHILNMFDKRITEFAETKFKRDGIDVKLGSMVIKVTENEICTKERGTGKVVSLPYGMVVWSTGIGPRPEVVQFMKDIGQGNRRAISTDEWLRVEGFDNIYALGDCATVNQRRVMEDIAVIFSKADKNNTGKLDPDEFQEVVGDIIERYPQVAIYLKKKQMSNIVALLKQSQDNPAVVDIATFKSGLSEVDSQMKNLPATAQVAAQQGEYLANCFNRIEECEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQAAAQLPGDWVSIGHSTQWLWYSVYASKQVSWRTRFLVVSDWGRRVVFGRDSSRI 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0426 574 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 45 405 - -
Dere07g0426 574 SUPERFAMILY FAD/NAD(P)-binding domain 54 272 IPR036188 -
Dere07g0426 574 SUPERFAMILY FAD/NAD(P)-binding domain 220 374 IPR036188 -
Dere07g0426 574 ProSitePatterns EF-hand calcium-binding domain. 389 401 IPR018247 -
Dere07g0426 574 Pfam Pyridine nucleotide-disulphide oxidoreductase 55 379 IPR023753 GO:0016491
Dere07g0426 574 ProSiteProfiles EF-hand calcium-binding domain profile. 376 411 IPR002048 GO:0005509
Dere07g0426 574 Gene3D - 429 573 - -
Dere07g0426 574 Gene3D - 47 403 - -
Dere07g0426 574 SUPERFAMILY EF-hand 330 458 IPR011992 -
Dere07g0426 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 57 76 - -
Dere07g0426 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 159 177 - -
Dere07g0426 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 220 238 - -
Dere07g0426 574 SMART efh_1 380 408 IPR002048 GO:0005509
Dere07g0426 574 PANTHER NADH DEHYDROGENASE 47 574 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0426 Dere-ChrDere07 7086009 7090161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0426 1 574 Chloroplast and Mitochondria Gene Families AT4G21490 69.535 0.0 811
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0426 07 7086009 7090161 Dere07g0426 07 7086009 7090161 ECH