Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0425 ATGTCGATATCGTCCATCTTCAGCAAAGCTTCCAGGACTTTCCATAGCTACCATTCTTCCTCTAAGCTTCTCCTTCTCTGCACTCTCAGCGGTGGAGGTGTGGTGGCATACTCAGAATTGCAATCTGATTCTGGATCTCCTAGTATTGCCCCTAATGAGCCTAGGAAAAAGAGAGTGGTGGTTCTTGGAACTGGGTGGGCTGGTACGAGTTTCCTTAAGGATCTGGATGCTTCCATATATGATGTGCAGGTTGTTTCACCTCGCAACTACTTTGCATTTACTCCCTTATTACCCAGCGTCACTTGTGGGACAGTTGAAGCACGGAGCATTGTGGAGCCAGTTCGAAACATCATAAAAAAGAGAAAAGGAGAAATTAAATTTTGGGAGGCAGAGTGTGTCAAGATTGATGCTGCAAATAAAAAGGTTTTTTGTCGATCCAATATTGATGGCAACTTAGTGGGAAATGGTGAATTTGCTCTAGAATATGACTTTCTGGTTGTAGCAACAGGAGCTCAAGTAAATACTTTTAACACCCCTGGTGTCAAGGAAAACTGTCATTTTTTAAAGGAGGTGGAGGATGCTCAGAGGATTAGAACATCTGTGATAGATTGCTTTGAGAAGGCTATTCTTCCTAGTTTAACTGATGAAGAGCGACAAACCAATCTTCATTTTGTAATTGTTGGAGGGGGTCCAACTGGTGTGGAATTTGCTGCAGAGTTGCATGATTATGTCCAAGAAGATTTAATCAAACTATATCCAACAGTTAAAGATATAGTGAAAATAACGCTGATCCAATCAGGAGATCACATCTTGAACACGTTTGATGAAAGAATCAGTGCATTTGCTGAGCAGAAATTTGGAAGAGATGGTATAGATGTTCAAACAGGATGCCGAGTTGTCAATGTCACTGACAAGGAAATTACAATGAAGGTAAAATCAACAGGAGAGGTTTGCTCAGTACCCCATGGATTGATAGTCTGGTCCACTGGCATCGGGACTCTTCCAGTTGTGAGGGACTTCATGGAACAAATTGGTCAGGCTAATAGAAAGGTCCTGCAGACTGATGAATGGTTACGAGTGACAGGATGTGAAGCTGTGTATGCTATTGGTGACTGTGCTTCAATACATCAACGTAAAATCATGGATGATATCTCGGCCATATTCAAATCTGCAGACAAGGACAACTCCAGTACCTTAACTGTTAAAGAATTCCAGGATGTGATGGATGACATCATCTTAAGATATCCCCAAGTGGAACTATATCTAAAGAGCAAGCATATGCTTCATGCGACTGATCTGTTGAAAGATCCTCAAGGGAACGACAGAGAGGTAATAGACATAGAAGGGTTTAAGCTGGCCCTTCGTCATGTGGATTCACAGATGAAGAGTCTGCCGGCAACAGCACAAGTTGCTGCCCAACAGGGTGTATATCTAGCTAAATGCTTCAACCGCATGGAGCAATGTGCAGAGAATCCTGAAGGTCCTATAAGATTTAGAGGATCTGGACGCCATATGTTTCGTCCCTTCCGGTACAAGCATCTTGGGCAATTTGCTCCTCTGGGTGGAGAGCAGGCAGCAGCAGAACTTCCTGGAGATTGGGTTTCGTTGGGTCACAGCACTCAGTGGCTTTGGTATTCTGTATATGCGAGCAAGCAAGTGAGCTGGCGCACAAGGGTGTTGGTGATCTCTGATTGGACAAGAAGATTCATCTTTGGGAGAGACTCAAGTCGTATTTAA 1737 0.4341 MSISSIFSKASRTFHSYHSSSKLLLLCTLSGGGVVAYSELQSDSGSPSIAPNEPRKKRVVVLGTGWAGTSFLKDLDASIYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEIKFWEAECVKIDAANKKVFCRSNIDGNLVGNGEFALEYDFLVVATGAQVNTFNTPGVKENCHFLKEVEDAQRIRTSVIDCFEKAILPSLTDEERQTNLHFVIVGGGPTGVEFAAELHDYVQEDLIKLYPTVKDIVKITLIQSGDHILNTFDERISAFAEQKFGRDGIDVQTGCRVVNVTDKEITMKVKSTGEVCSVPHGLIVWSTGIGTLPVVRDFMEQIGQANRKVLQTDEWLRVTGCEAVYAIGDCASIHQRKIMDDISAIFKSADKDNSSTLTVKEFQDVMDDIILRYPQVELYLKSKHMLHATDLLKDPQGNDREVIDIEGFKLALRHVDSQMKSLPATAQVAAQQGVYLAKCFNRMEQCAENPEGPIRFRGSGRHMFRPFRYKHLGQFAPLGGEQAAAELPGDWVSLGHSTQWLWYSVYASKQVSWRTRVLVISDWTRRFIFGRDSSRI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0425 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 48 408 - -
Dere07g0425 578 SUPERFAMILY EF-hand 337 465 IPR011992 -
Dere07g0425 578 Gene3D - 47 404 - -
Dere07g0425 578 Gene3D - 443 577 - -
Dere07g0425 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 425 577 - -
Dere07g0425 578 SUPERFAMILY FAD/NAD(P)-binding domain 223 377 IPR036188 -
Dere07g0425 578 Pfam Pyridine nucleotide-disulphide oxidoreductase 57 380 IPR023753 GO:0016491
Dere07g0425 578 ProSiteProfiles EF-hand calcium-binding domain profile. 379 414 IPR002048 GO:0005509
Dere07g0425 578 SUPERFAMILY FAD/NAD(P)-binding domain 56 275 IPR036188 -
Dere07g0425 578 PANTHER NADH DEHYDROGENASE 52 578 IPR045024 GO:0003954|GO:0006116
Dere07g0425 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 162 180 - -
Dere07g0425 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 223 241 - -
Dere07g0425 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 59 78 - -
Dere07g0425 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 351 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0425 Dere-ChrDere07 7074418 7080941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0425 5 578 Chloroplast and Mitochondria Gene Families AT4G21490 67.698 0.0 803
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g0425 07 7074418 7080941 Dere07g0425 07 7074418 7080941 ECH