Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0407 ATGGGTGGGAAGAGATCGGCTTTAGAGTACAAAGGAGGGACGATCTATGGACAAGTTTTATTGGTATTTATGTTGATCTGCACGATTCAGTTTTCGCAAGCAGACACTAATCCTACTGACGTTGCTGCAATAAATAACTTATATGCTGCGCTGGGCTTCCCTGTTCTCCCTGGGTGGGTTCCAAGTGGGGGAGACCCGTGCGGACAAGGGTGGCAAGGCATTCAGTGTAATGGTTCAGTTATACAGAAAATAGTTCTTAATGGTGCAAATTTGGGAGGCGAACTGGGTGATAGTTTGGGAATGTTTGTTTCTATCAGAGCAATAGATCTAAGCAACAACCACATTGGGGGAAGTATTCCATCCAGTTTACCAGTCTCCATGCAGAATTTTTTTCTTTCAGACAACCAGTTCACTGGAAGTATTCCAACCTCTTTATCCACATTGACTGAACTGACAGACATGTCTCTCAATGACAATCAATTAACTGGAGAAATACCAGATGTCTTCCAATCACTCACGAAATTGATCAATCTAGATTTATCTAGTAATAATTTGAGTGGGGAACTGCCTCCTTCTGCAGAGAATTTGTTAGCTCTGACCACCCTACATTTGCAGAACAATCAACTATCTGGAACCCTTGATGTGTTACAAGACCTTTCACTGAAAGATTTGAATGTAGAGAACAACCAATTTAATGGACCAATTCCTCAAAAGTTGCTAAGCATCCCAAACTTCAGAAAGGATGGAAACCCATTTAATGTTAATACTACTGTAGCTCCAGCCTCTCCACCTCGTTCTCCTGTGACAGGATCACCAGGAACCCTGGTTCCTGGGGCACCGACTTCTGGACGTGTACCTACTAAACCAGCTGATGGACCAACTGCATCAAAGGAATCTAATTCTGGAAAGTCAAAAAAAAGCACCAAAAGGGTGGTTTGGATATCTATTGCAAGCGTATTAGGATTTATTATTTTGGTATTGGCACTCCTTCTCTTTACTCCAAGATGTACCAGAAGGGAAAGGGCTGGCAGAGTTTCCAAGCAACGTCAAATTGGTGCATATGGGGATGAAAGACAGACTCCTAGAGATTATGGGGCTATGGTCCAGCCACCCAGTCAAACTGAGAAAGTACCAAAGGGGGCTGATCTGGGACCCAAAGAACCTCGTCAAGCAGAGACCAGGAGAGTGGAAGCAATTCCAAGGCCACAGGTTGAGCAAGAGAAAGATGTGCAAAGAATGGGAACATTGCCCAAGCAGGAGGCTCATGAGATAGATATGAGCGCACTAGAAGTGTATTCATTGCCTCCAGCTCCCCCTCCACCTCCTACCCCACCACCACCTCCTCCTCCTCCCCCTCCACCACCGCCCCCGCCACCTGCTGAGCCAGTACCCCGCCGAGGGACTGCAGTCATTCCTTCAAAAAATCCAGTTCATCCCACTTTTGCAAAATCTTTCACCATTGCATCTCTTCAACAGTATACAAACAGCTTTTCTCAAGATAACCTTATAGGAGGAGGCATGCTGGGGAGTGTGTATAGGGCAGAGCTTCCTGATGGGAAGCTACTTGCTGTGAAGAAACTGGACAAGAAAGCTTCTGATCACCAAAAGGATCACGAGTTTCTTGAACTGGTAAACAGTATTGACAGAATCAGGCATGCAAATATCGTTGAGCTTATTGGCTACTGTTCAGAGCATGGACAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGGTCACTGCAGGATGCCCTCCATTCAGATGATGAGTTCAAAGCAAGACTGTCATGGAATGCTCGCATTCGGATAGCACTTGGGGCGGCTAGAGCCTTAGAGTATTTACATGAGATGTGCCAGCCGCCTGTTGTGCATAGAAATTTCAAGTCTGCCAATATTCTCCTTGACGATGATCTATCTGTGCGTGTTTCTGATTGTGGTCTGGCTCCCTTGATAGCTTCAGGTTCTGTGAGTCAGCTCTCAGGACACCTGCTAACAGCTTACGGCTATGGAGCTCCAGAATTTGAGTCAGGAATTTACACAGTCCAGAGTGACGTATACAGTTTTGGAGTGGTTATGTTAGAACTTCTGACAGGCCGACAATCCTATGACAGGACCCGCACACGGGGGGAGCAGTTTCTAGTGAGATGGGCAATTCCCCAACTACATGACATTGATGCATTATCAAATATGGTCGATCCTTCTCTCAATGGAGACTACCCTGCCAAATCATTGTCAAACTTTGCAGACATTATTTCTCAATGTGTTCAGCCGGAGCCAGAATTTAGGCCACCAATGTCAGAGGTTGTTCAGTACCTACTAGATATGATAAGGAGGGAGTCTCAGAGAAGTGGATCAAATGAAGATTAA 2364 0.4539 MGGKRSALEYKGGTIYGQVLLVFMLICTIQFSQADTNPTDVAAINNLYAALGFPVLPGWVPSGGDPCGQGWQGIQCNGSVIQKIVLNGANLGGELGDSLGMFVSIRAIDLSNNHIGGSIPSSLPVSMQNFFLSDNQFTGSIPTSLSTLTELTDMSLNDNQLTGEIPDVFQSLTKLINLDLSSNNLSGELPPSAENLLALTTLHLQNNQLSGTLDVLQDLSLKDLNVENNQFNGPIPQKLLSIPNFRKDGNPFNVNTTVAPASPPRSPVTGSPGTLVPGAPTSGRVPTKPADGPTASKESNSGKSKKSTKRVVWISIASVLGFIILVLALLLFTPRCTRRERAGRVSKQRQIGAYGDERQTPRDYGAMVQPPSQTEKVPKGADLGPKEPRQAETRRVEAIPRPQVEQEKDVQRMGTLPKQEAHEIDMSALEVYSLPPAPPPPPTPPPPPPPPPPPPPPPPAEPVPRRGTAVIPSKNPVHPTFAKSFTIASLQQYTNSFSQDNLIGGGMLGSVYRAELPDGKLLAVKKLDKKASDHQKDHEFLELVNSIDRIRHANIVELIGYCSEHGQRLLIYEYCSNGSLQDALHSDDEFKARLSWNARIRIALGAARALEYLHEMCQPPVVHRNFKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGHLLTAYGYGAPEFESGIYTVQSDVYSFGVVMLELLTGRQSYDRTRTRGEQFLVRWAIPQLHDIDALSNMVDPSLNGDYPAKSLSNFADIISQCVQPEPEFRPPMSEVVQYLLDMIRRESQRSGSNED 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0407 787 MobiDBLite consensus disorder prediction 433 465 - -
Dere07g0407 787 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 465 574 - -
Dere07g0407 787 MobiDBLite consensus disorder prediction 432 476 - -
Dere07g0407 787 SUPERFAMILY L domain-like 37 244 - -
Dere07g0407 787 Pfam Protein tyrosine and serine/threonine kinase 500 771 IPR001245 GO:0004672|GO:0006468
Dere07g0407 787 ProSiteProfiles Protein kinase domain profile. 497 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0407 787 SUPERFAMILY Protein kinase-like (PK-like) 476 771 IPR011009 -
Dere07g0407 787 Gene3D Phosphorylase Kinase; domain 1 469 574 - -
Dere07g0407 787 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 76 771 - -
Dere07g0407 787 MobiDBLite consensus disorder prediction 251 307 - -
Dere07g0407 787 MobiDBLite consensus disorder prediction 380 414 - -
Dere07g0407 787 MobiDBLite consensus disorder prediction 339 414 - -
Dere07g0407 787 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 575 785 - -
Dere07g0407 787 Gene3D Ribonuclease Inhibitor 39 256 IPR032675 -
Dere07g0407 787 SUPERFAMILY Formin homology 2 domain (FH2 domain) 448 457 - -
Dere07g0407 787 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 265 - -
Dere07g0407 787 Gene3D Transferase(Phosphotransferase) domain 1 575 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0407 Dere-ChrDere07 6949110 6955758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0407 31 783 Strubbelig Receptor Gene Family AT4G03390 63.755 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Dere07g0407 PK_Tyr_Ser-Thr 7.5e-44 CL0016