Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0401 ATGCTACCAAACACATTGCCTACAAGGGTGGGAGATGATAGGTCTGTTCCATATTTAGAGGCAGAGTCTGACCAGCATTCTGAACCATTGAATGTTAATCGTGCTGATGTTCCTTCAGTAAGTTGTGATGCTGAAAAATCATGCCTGCAGTCTCCCCCCCGAAGCACAAAGCAAGCAAATAAGGAGCTGTACGAAGGTTCACATGCAAGGAATGGCTGTTGGGAGGGCTGTGGATTTGACTCGGTTGTCTACACCGATAATGAAGATGATGTGATGATGGTTGGAGATATTCCATGGGATGAGTTTTGTGGTGCTGTGAGGAAAATTTTCCTCTACACAGTAGAGGAGGTGAAGAAGCTCTCGCCCAAAATACTGCTTTCCACTGGTTTTTAG 393 0.4529 MLPNTLPTRVGDDRSVPYLEAESDQHSEPLNVNRADVPSVSCDAEKSCLQSPPRSTKQANKELYEGSHARNGCWEGCGFDSVVYTDNEDDVMMVGDIPWDEFCGAVRKIFLYTVEEVKKLSPKILLSTGF 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0401 130 Pfam AUX/IAA family 81 121 IPR033389 -
Dere07g0401 130 Gene3D - 54 121 - -
Dere07g0401 130 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0401 Dere-ChrDere07 6894873 6895621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0401 10 127 B3 DNA Binding Superfamily AT1G59750 46.939 1.13e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Dere07g0401 AUX_IAA 1.1e-07 CL0072