Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0382 ATGGATCGATCGAGCGGCAAGTTATTGGCCCTCAATAGTGGCAAATCCGCTAATGGTGTTGACAACACTCTGATGGGAGAAAGCCACGATTCAGGCCTTCGGAGGCAACCATGGAAGCCAGTTTTTTATGAAGCTTCTGTGCCAGATAGGCCTCTCAAAAGAATCTGTAGCCCTGAGCGTCAAATCCCATATCAGCCCTCTGTTTCTGTCAATGTGTCTCCTCCTTCATCGTCTTCCTCAAGAATCACGTTTCCTTTTGCCGTTGATGGGTCTCTTCACCAATCTGGAACTACAAATCTGCCTGTTTTTTGTCCAACGTTATATCAGCAACCCATGATGTCTTTGGGATACCCACCATATTTAGCATCAGATTCAGTACAACATCATCAGCATCAGCATCGTCAGCAGCAGCAGCAGCAGCTTCGGCCATTGCATACTACTAAGCTCTACAGGGGAGTGAGGCAACGCCACTGGGGCAAATGGGTGGCTGAGATTCGTCTTCCTAAAAACAGAAGTCGCCTCTGGTTAGGCACATTTGACACTGCAGAAGATGCTGCTTTGGCTTATGATCGTGAGGCCTTTAAGCTCAGGGGAGAGAATGCTAAGCTCAACTTCCCCGAGCTCTTTCTCAATAAAGCTCCAAATTCAGCTGCTTCCTCTTCTTCCTCAAAGCAACCTGAACCACCAGAAGAAAATCATGAAATTCAGGAATCTGCTAAAGGTAATGAAACAGGGGAAGGTGTTTCTGAGGCAGAGAAATTAATTTGGGGGGACATGGAGGCTTGGTATAACGTGATTCCGGAAGGTTGGGGACCCGAGAGCCCTGTGTGGGATGATTTTGACACCACCAATAACCTTCCGTTTCAGCCACAGATTCCTTTCGTGAATCCAAATCAGCAAGAATTTCATGAGGTTGATGCTCAGAGACAAGAAGACAACACAGGACCAGGTTGTTGTTCCACTTCTTCCTCGTCTTGTCCCATGATGCCATTCTTGTGA 999 0.4715 MDRSSGKLLALNSGKSANGVDNTLMGESHDSGLRRQPWKPVFYEASVPDRPLKRICSPERQIPYQPSVSVNVSPPSSSSSRITFPFAVDGSLHQSGTTNLPVFCPTLYQQPMMSLGYPPYLASDSVQHHQHQHRQQQQQQLRPLHTTKLYRGVRQRHWGKWVAEIRLPKNRSRLWLGTFDTAEDAALAYDREAFKLRGENAKLNFPELFLNKAPNSAASSSSSKQPEPPEENHEIQESAKGNETGEGVSEAEKLIWGDMEAWYNVIPEGWGPESPVWDDFDTTNNLPFQPQIPFVNPNQQEFHEVDAQRQEDNTGPGCCSTSSSSCPMMPFL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0382 332 Gene3D AP2/ERF domain 149 207 IPR036955 GO:0003700|GO:0006355
Dere07g0382 332 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 29 280 - -
Dere07g0382 332 Pfam AP2 domain 150 198 IPR001471 GO:0003700|GO:0006355
Dere07g0382 332 ProSiteProfiles AP2/ERF domain profile. 149 206 IPR001471 GO:0003700|GO:0006355
Dere07g0382 332 SMART rav1_2 149 212 IPR001471 GO:0003700|GO:0006355
Dere07g0382 332 MobiDBLite consensus disorder prediction 214 249 - -
Dere07g0382 332 MobiDBLite consensus disorder prediction 1 33 - -
Dere07g0382 332 MobiDBLite consensus disorder prediction 9 25 - -
Dere07g0382 332 SUPERFAMILY DNA-binding domain 149 207 IPR016177 GO:0003677
Dere07g0382 332 FunFam Ethylene-responsive transcription factor 2 148 207 - -
Dere07g0382 332 PRINTS Ethylene responsive element binding protein signature 172 188 IPR001471 GO:0003700|GO:0006355
Dere07g0382 332 PRINTS Ethylene responsive element binding protein signature 150 161 IPR001471 GO:0003700|GO:0006355
Dere07g0382 332 CDD AP2 148 208 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0382 Dere-ChrDere07 6737553 6738551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0382 1 281 AP2-EREBP Transcription Factor Family AT4G28140 40.397 1.12e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere07g0382 AP2 5.2e-13 CL0081