Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0352 ATGGGCTGCATATGTTCCAAGACTTCAGCTGTGGAAGACAGCCAGGAAGATTTGACAAAGAAATTATCATCTAGCAAGAGGGGATCGGAGCTGCGTGTTTCACGATTGAATTCCTCGAAAAGCAATGAGGGGGTTTGGGCAAAAGATAAGTTAGATGGTAGTGATGTGAAGGTTTCGTTAATTGAACAGAAAACCAGTGGCTCATTGCTGTTGTACGATGACCACTTAGGGGAAAAGGAAATAGCGAAGCCTGAATTAACTGTCCTTGACAATCCCGGTCTTGGAAGGGTTCCAAAGGCTGCAGAAGGAGAGCAAGTTGCAGCAGGATGGCCGAGTTGGCTTTCTTCTGTGGCGGGTGAAGCTATCAAGGGATGGGTACCTCGAAGTGCAAATACTTTTGAGAGGTTATATAAAATTGGCCAAGGAACTTACAGTACTGTTTATAAAGCACGTGATATGACTCACCAAAAAATTGTTGCTTTGAAGAGAGTACGCTTTGACAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGGGAAATCCTTGTTCTGCGGAGGCTTGACCACCCAAATATAATCAAGTTGGAGGGCTTGATAACATCTCAGACTTCTCGCAGCATGTACCTCATTTTTGAGTATATGGAGCATGATCTTACTGGACTAGCATCACGTCCTGGCATCAAGTTTTCTGAACCACAGGTTAAATGCTACATGCAACAACTTCTTAGTGGATTGGATCATTGTCATAGTCGTGGTATCCTCCATCGTGACATAAAGGGTTCAAATCTTCTCATTGACCATAATGGCATTTTAAAAATTGCAGATTTTGGTTTGGCAAGTTTTTTTGATCCCCATCACAGTGTTCCATTGACCAGCCGTGTAGTGACACTCTGGTATAGACCGCCAGAACTTTTACTTGGAGCATCTCATTATGGAGTTGCTGTAGATTTGTGGAGCACTGGTTGCATACTGGGGGAACTGTATACTGGCAGGCCCATATTGCCAGGAAAAACGGAGGTTGAGCAATTGCATAGGATTTTCAAGCTATGTGGATCACCATCTGAGGACTATTGGCTTAAATTGCGGTTGCCACATTCAAAAGTATTCAAGCCTTCATACCATTATAGACGATGTGTTGCAGAAACATTTAAAGAATATCCATCTGCTTCAGTGAGGCTTATAGAGACACTGCTTTCTGTTGATCCCGCACAACGAGGGACAGCAGCGAGTGCTCTAAAATGTGAGTTCTTTACAACAGAGCCCCTTGCTTGTGATTCATCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATTGATTATAAATTTCGGGATGTAGTAACCAAAAGGCAAGGAGCTGTTGGAGGAAGGGTGCAGAAAGTTGGCTCAGGAGTTAGACAAGGAAAGGTACCTGGGCCTCTTCTTCCAGCGAAGGACAAGGTTGACCCACGCATATCAATGCAGCAAGCACAATGTGATTCCAACTCAGAGAGCCGAAGTGAATTGTTCAATCCCCACAGAGAACCTGTTTCTGGATTTTGGGTTTATCCCCCACATAAACAATCAGATGTTAAAGAAATGGAAAATAATTTCAGTGGGCATATTTGTAAGAGGTCTTCACATTCAGGTCCATTGGTACAAGGTGCTCGATGGGCAAAGGGTGGAAAGGAAGTTGATGAAGGGCCTCTTGGTTCAAACAGACTCAACTTATCAAAACTATCTGGCTTAGTGGCATCGAGGACTTCATTATCTGAAGATCAGGAGGAAAAACCAATTCCCTTGCTGCCTAGAAAAACAATTGAAGTAAAAAAATCCGTTGAGTCAACTAATGGATTAGAGTCAAGAAGGCAGGATAGAAAACGCCATTCTCAAAGAACTGTGGATCTCTGTCAGATAGAAAATGCAAGAGCCTCCACTAATGAATTAACTCCGGGAGGTCGTGGGTCCATGGGAAACAAGATCTATCACTCTGGTCCATTACTGGCTTCATCAAACAACATGGATAAGATGCTTAAAGAGCATGATCGAAAGATCCAAGAATTTTCAAGGCGATCACGAATTGACAAGATAAGAGGTGAGAAGATTCGTGCACAGTGA 2094 0.4308 MGCICSKTSAVEDSQEDLTKKLSSSKRGSELRVSRLNSSKSNEGVWAKDKLDGSDVKVSLIEQKTSGSLLLYDDHLGEKEIAKPELTVLDNPGLGRVPKAAEGEQVAAGWPSWLSSVAGEAIKGWVPRSANTFERLYKIGQGTYSTVYKARDMTHQKIVALKRVRFDNLDPESVKFMAREILVLRRLDHPNIIKLEGLITSQTSRSMYLIFEYMEHDLTGLASRPGIKFSEPQVKCYMQQLLSGLDHCHSRGILHRDIKGSNLLIDHNGILKIADFGLASFFDPHHSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKLRLPHSKVFKPSYHYRRCVAETFKEYPSASVRLIETLLSVDPAQRGTAASALKCEFFTTEPLACDSSSLPKYPPSKEIDYKFRDVVTKRQGAVGGRVQKVGSGVRQGKVPGPLLPAKDKVDPRISMQQAQCDSNSESRSELFNPHREPVSGFWVYPPHKQSDVKEMENNFSGHICKRSSHSGPLVQGARWAKGGKEVDEGPLGSNRLNLSKLSGLVASRTSLSEDQEEKPIPLLPRKTIEVKKSVESTNGLESRRQDRKRHSQRTVDLCQIENARASTNELTPGGRGSMGNKIYHSGPLLASSNNMDKMLKEHDRKIQEFSRRSRIDKIRGEKIRAQ 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0352 697 MobiDBLite consensus disorder prediction 459 478 - -
Dere07g0352 697 SMART serkin_6 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0352 697 FunFam probable serine/threonine-protein kinase At1g54610 120 215 - -
Dere07g0352 697 Gene3D Transferase(Phosphotransferase) domain 1 216 453 - -
Dere07g0352 697 Pfam Protein kinase domain 134 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0352 697 MobiDBLite consensus disorder prediction 675 697 - -
Dere07g0352 697 PANTHER CELL DIVISION PROTEIN KINASE 131 422 - -
Dere07g0352 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Dere07g0352 697 ProSiteProfiles Protein kinase domain profile. 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0352 697 SUPERFAMILY Protein kinase-like (PK-like) 126 422 IPR011009 -
Dere07g0352 697 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
Dere07g0352 697 Gene3D Phosphorylase Kinase; domain 1 120 215 - -
Dere07g0352 697 MobiDBLite consensus disorder prediction 604 624 - -
Dere07g0352 697 CDD STKc_CDK9_like 133 417 - -
Dere07g0352 697 FunFam probable serine/threonine-protein kinase At1g54610 216 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0352 Dere-ChrDere07 6510984 6516415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0352 125 460 Core Cell Cycle Gene Families AT5G10270 48.580 7.62e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dere07g0352 Pkinase 2.5e-67 CL0016