Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0350 ATGTCTTCTTCATCCATCTTTCTCCTCTTCATCCAAATCCTTCTTCTCCTTAGCTCAGCTTCAGCCACAGAATTCATCTACAACACCAACTTCAACTCTACCAACATCCATCTCTCCGGTAACGCCACTGTCGAATCTTCAATTCTCACCCTCACCAACCACACCTCCTTCTCCATAGGCCGTGCTTTTTACCCTTCAAAAATACCCACAAAACCCTCCAATTCTTCCATCTCTTCTTCTCCATTACCATTCTCAACCTCCTTCATTTTCTCCATTGCCCCTTTTAAAGACCTCTTGCCTGGCCACGGATTCGTCTTCGTTCTCTCGCCATTTACGGGAACAACGGGAGTTAGCTCTGCTCAACATCTGGGTCTCTTCAATTTCACCAATGACGGTAATCCCAACAACCATGTCTTTGGTATTGAATTTGATGTGTTTCAGAACCAAGAGTTTAATGATATCAATGATAATCACGTGGGTGTGGATATAAATTCGCTTACTTCTTTTAGTTCACATGCTGCGGGCTTCTGGGTTGGGGAAGATGATACGGAGTTTGAGGATTTGAAGCTTAACGATGGGGAGAACTATCAAGTGTGGATTGATTACTTGGATTCAAGAATTAATGTAACTATGGCTCGTGTAGGGCGAAAGAGGCCTTGGAGACCTTTGATTAGTGAGCTTGTTAATCTCTCTTCGGTTCTTTTGGATGAAATGTATGTGGGATTTTGTGGGGCAACCGGGCAACTGGTGGAGAGTCACAAAATTTTGAGTTGGAGCTTCAGTAATTCGAATTTTTCCATTGGCAATGCTTTAGTGACTACAAATTTGCCTTCATTTGTACTTCCTAAAGGATCAGTTGTAGGATCAAAAGGTTTTATTATAGGAGTCAGTATGGGTGTTTTCTTTGTCATTGGCTGTTCCACTGTGATATTTGTGCTTTTTTTGAGAAGGAAAAGTAGCACAAGAAATGAGGAAGACATTGAAGATTGGGAATTGGAATATTGGCCCCACCGTATACGGTATGAAGATATTTATGCTGCTACTAAAGGATTTTCAGACCAAAATGTGATTGGGTTTGGAGGGAACGGGAATGTCTATAGAGGGGTTTTACAAGAAGTAGAAGTTGCAGTAAAAACAATCCCTTGTGAAAGTGAGCAAGGCATGAGGGAATTTTTGTCTGAGATTTCTAGTTTAGGCAGATTGAAGCATAGGAATGTGGTGCCATTGAGAGGTTGGTGTAAAAGAGAAAAAGAAAGTTTGATTTTAGTTTATGATTATATGAATAATGGAAGTTTAGACAAAAGGATATTTGATGTTGATGAGAACACAATTTTGACGTGGAAGGAAAGAATCAAGGTGTTGAAGGATGTGGCTCACGGATTATTGTACTTGCACGACGGTTGGGATGTTAAGGTCTTGCATAGAGACATCAAGGCTAGCAATGTATTACTTGATAAGGATATGAATGCCAGGTTGGGGGATTTTGGACTTGCTCGAATGTATCATCATGGGCAGCTGGCTAATACCACACAAGTGATTGGGACAGTAGGATACATGGCACCTGAACTAATTCGAATGGGGAGAGTCTCAACTCAGACTGATATCTACAGTTTTGGTGTGTTAATTTTAGAGGTAGTATGTGGGAGAAGACCAACTGAACAAGATAAGCCAGGTTTGGTTGCTTGGGTATGGAGGCTAATGGAGAGAGGAGAATTATGTTCTGCTCTTGATCAACATTTAAAGTGGAGGAGTGATTTTGACACCAATGAAGTTAATAGAGTTCTTCATCTTGCTTTGTTGTGTACACTCTCTGAGCCTTATGCTAGGCCAACTATGAGACAGGTTGTGAAGGTGCTGGGAGGAGAGAGTATGGACATGGACATGACCTTGCTGGAGAAAATAAATTCAGCGGCCACCTCTTCTGGAAATGCTGGAAGTTTAAGTAACAGCATGCATCCTACAGTTGGGGAAATTTCCTGGTCCAATTTCTCTTCCACAATTCAGGAGGGCCGATGA 2016 0.4162 MSSSSIFLLFIQILLLLSSASATEFIYNTNFNSTNIHLSGNATVESSILTLTNHTSFSIGRAFYPSKIPTKPSNSSISSSPLPFSTSFIFSIAPFKDLLPGHGFVFVLSPFTGTTGVSSAQHLGLFNFTNDGNPNNHVFGIEFDVFQNQEFNDINDNHVGVDINSLTSFSSHAAGFWVGEDDTEFEDLKLNDGENYQVWIDYLDSRINVTMARVGRKRPWRPLISELVNLSSVLLDEMYVGFCGATGQLVESHKILSWSFSNSNFSIGNALVTTNLPSFVLPKGSVVGSKGFIIGVSMGVFFVIGCSTVIFVLFLRRKSSTRNEEDIEDWELEYWPHRIRYEDIYAATKGFSDQNVIGFGGNGNVYRGVLQEVEVAVKTIPCESEQGMREFLSEISSLGRLKHRNVVPLRGWCKREKESLILVYDYMNNGSLDKRIFDVDENTILTWKERIKVLKDVAHGLLYLHDGWDVKVLHRDIKASNVLLDKDMNARLGDFGLARMYHHGQLANTTQVIGTVGYMAPELIRMGRVSTQTDIYSFGVLILEVVCGRRPTEQDKPGLVAWVWRLMERGELCSALDQHLKWRSDFDTNEVNRVLHLALLCTLSEPYARPTMRQVVKVLGGESMDMDMTLLEKINSAATSSGNAGSLSNSMHPTVGEISWSNFSSTIQEGR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0350 671 Gene3D Transferase(Phosphotransferase) domain 1 427 637 - -
Dere07g0350 671 FunFam L-type lectin-domain containing receptor kinase S.4 21 268 - -
Dere07g0350 671 ProSiteProfiles Protein kinase domain profile. 351 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0350 671 SMART serkin_6 351 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0350 671 FunFam L-type lectin-domain containing receptor kinase S.4 427 632 - -
Dere07g0350 671 ProSitePatterns Protein kinases ATP-binding region signature. 357 378 IPR017441 GO:0005524
Dere07g0350 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Dere07g0350 671 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 312 426 - -
Dere07g0350 671 Pfam Protein kinase domain 352 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0350 671 Pfam Legume lectin domain 23 264 IPR001220 GO:0030246
Dere07g0350 671 SUPERFAMILY Protein kinase-like (PK-like) 327 619 IPR011009 -
Dere07g0350 671 Gene3D Phosphorylase Kinase; domain 1 314 426 - -
Dere07g0350 671 Gene3D - 21 273 - -
Dere07g0350 671 PANTHER - 39 623 - -
Dere07g0350 671 CDD lectin_legume_LecRK_Arcelin_ConA 23 256 IPR001220 GO:0030246
Dere07g0350 671 CDD STKc_IRAK 357 619 - -
Dere07g0350 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 263 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0350 Dere-ChrDere07 6500509 6502524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0350 21 575 Receptor kinase-like Gene Family AT4G04960 60.142 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere07g0350 Pkinase 2e-48 CL0016