Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0342 ATGGCCGATGGGCCACAGCACCCATCAGATGTTCAGAAGATTGCTGGACAGCTTCTTGCGAGCAACTACAGTGGCATGGCAGTTGTACCACCTATGTCGCCAATTACTGTGCATGCTCCAGCCGAGAAGGGGACATCTGCATTCTTAGTGGATTTCCTGATGGGAGGAGTGTCTGCTGCTGCTCTGAACTTTGCTTTCAAGGATTATTTCAAGAGGCTTTTTAACTTCAAGAAAGACAAAGATGGGTACTGGAAGCGGTTTGCTGGTAATCTGGCCTCTGGTGGGGCTGCTGGGGCTTCGTCTCTCTTGTTTGTCTGTTCTTTGGACTATGCTCGAACTCGTTTGGCAAATGATGCAAAAGCTGCCAAGAAGGGTGGTGAGAGGCAGTTCAATGGCTTGATTGATGTTTACAGGAAAACCATCAAGTCTGATGGTATTGCTGGTCTTTATCGTGGATTCAACATCTCTTGTGTTGGAATCATAGTGTATCGTGTCTCTACTTTGGGTTTGCGTAGAAGGATGATGATGACTTCTGGAGAAGCTGTGAAATACAACAGCTCTCTGGATGCATTCAAGACAATTATTAAGAATGAGGGTACTAAGTCACTCTTTAAAGGTGCTGGTGCAAACAGTTTACGTGCTGTTGCAGGTGCTGGTGTGCTCGCTGGTTATGACAAGCTCCAGCTCTTACTACTAGGAAAGAAATATGGATCTGGTGGTGGTGGTTAA 729 0.4623 MADGPQHPSDVQKIAGQLLASNYSGMAVVPPMSPITVHAPAEKGTSAFLVDFLMGGVSAAALNFAFKDYFKRLFNFKKDKDGYWKRFAGNLASGGAAGASSLLFVCSLDYARTRLANDAKAAKKGGERQFNGLIDVYRKTIKSDGIAGLYRGFNISCVGIIVYRVSTLGLRRRMMMTSGEAVKYNSSLDAFKTIIKNEGTKSLFKGAGANSLRAVAGAGVLAGYDKLQLLLLGKKYGSGGGG 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0342 242 Gene3D Mitochondrial carrier domain 7 169 IPR023395 -
Dere07g0342 242 Gene3D Mitochondrial carrier domain 170 237 IPR023395 -
Dere07g0342 242 ProSiteProfiles Solute carrier (Solcar) repeat profile. 85 177 IPR018108 -
Dere07g0342 242 PRINTS Adenine nucleotide translocator signature 85 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere07g0342 242 PRINTS Adenine nucleotide translocator signature 59 71 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere07g0342 242 PRINTS Mitochondrial carrier protein signature 100 118 IPR002067 GO:0055085
Dere07g0342 242 PRINTS Mitochondrial carrier protein signature 150 168 IPR002067 GO:0055085
Dere07g0342 242 PRINTS Mitochondrial carrier protein signature 48 68 IPR002067 GO:0055085
Dere07g0342 242 Pfam Mitochondrial carrier protein 84 169 IPR018108 -
Dere07g0342 242 Pfam Mitochondrial carrier protein 171 233 IPR018108 -
Dere07g0342 242 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 170 240 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere07g0342 242 SUPERFAMILY Mitochondrial carrier 52 226 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0342 Dere-ChrDere07 6400414 6402922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0342 1 60 Antiporters AT5G13490 35.417 1.25e-09 55.8