Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0329 ATGGGCGGAAATGCAATGGAAGAGGAAGCATTAATGTTACAAGGTCAAGCTGACATATTGAAGTTCATCTTTGGCTTCGCTGATTCGATGGCCCTCAAATCTGCTGTGGAGCTGGGCATACCTGATATTATACACCGCCACGGTGGACCAATCAGCTTATCCCAGATCATCGCCGGTTTCTCCGATGCACCCTCTCCCGACATCGCCTGCCTCGCCCGCATCATGAGACTCCTCGTCCGCCGCAAGATCTTCGCTGCCCATCACTCATCCGACGGCGGAGACACGCTCTACGGCCTGACCCACTCTTCCAGGTGGCTCCTACGTGGCTCCGAGATGAACCTGGCTCCCGTGCTTCTCATGCAGAACCATCCATGGCTTCAGGCTCCGTGGCACTATCTGAGCCATTGCGTGAGAGAAGGCGGAATCGCGTTCAAGAAGGCTCATGGCCGTGAGATATTTGAGTTGGCATCGGAGGACCCAGAATTCAACAAGTTATTCAATGATGGGATGGCGAGTACGGCAACGATCGTGATGAGGACGATCGTAACAGAATATAAGAATGTGTTCGAGAGCATTAAATCATTGGTGGACGTGGGAGGTGGGATCGGAGGGACGGTGTCGGAGATCGTGAAATCGTATCCGCACATTAAGTGTATCAACTTTGATCTGCCGCATGTGGTCGCGACCGCACCTGATTACGAGAGAGTCACCCATGTTGGAGGAGACATGTTCCAAGCGATCCCTAGTGCAGATGCTGTTTTCATGAAGGTATATTATCTTTGA 783 0.5211 MGGNAMEEEALMLQGQADILKFIFGFADSMALKSAVELGIPDIIHRHGGPISLSQIIAGFSDAPSPDIACLARIMRLLVRRKIFAAHHSSDGGDTLYGLTHSSRWLLRGSEMNLAPVLLMQNHPWLQAPWHYLSHCVREGGIAFKKAHGREIFELASEDPEFNKLFNDGMASTATIVMRTIVTEYKNVFESIKSLVDVGGGIGGTVSEIVKSYPHIKCINFDLPHVVATAPDYERVTHVGGDMFQAIPSADAVFMKVYYL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0329 260 Pfam O-methyltransferase domain 130 256 IPR001077 GO:0008171
Dere07g0329 260 Gene3D - 3 106 IPR036388 -
Dere07g0329 260 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 260 IPR016461 GO:0008168
Dere07g0329 260 Gene3D Vaccinia Virus protein VP39 109 258 IPR029063 -
Dere07g0329 260 Pfam Dimerisation domain 30 79 IPR012967 GO:0046983
Dere07g0329 260 PANTHER O-METHYLTRANSFERASE 13 257 IPR016461 GO:0008168
Dere07g0329 260 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 256 IPR029063 -
Dere07g0329 260 SUPERFAMILY "Winged helix" DNA-binding domain 9 110 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0329 Dere-ChrDere07 6252463 6253245 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0329 30 256 Monolignol Biosynthesis Gene Families AT5G54160 41.991 1.12e-58 189