Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0327 ATGTTTCGCCAAACTATTCTTTATATAAAGGTGCCTGGCCGTCTTGTTGGTATCAATCACAAAGAAGAAAAGAAAACGCAGAGAAAGATGGGAGAGGAAGCATTAATGTTACAAGGTCAAGCTGATATATGGAAGTTCATCTTGAGCTTCGCGGATTCCATGGCCCTCAAATCTGCTGTGGAGCTCGGCATACCTGATATTATACATCGCCACGGTGGACCAATCAGCTTATCCCAGATCATCGCCGGTCTCTCCGATGCACCCTCTCCCGACATCACCTGCCTCGCCCGCATCATGAGACTCCTCGTCCGCCGCAAGATCTTCGACGCCCATCACCCATCTGACGGCAGAGACACGCTCTACGGCCTGACCCACTCTTCCAGGTGGCTCCTACGTGGCTCCGAGACGAACCTGGGTCCTTTGCTTCTCATGCAGAACCATCCTTGGCTTCAGGCTCCGTGGCACTATCTGAGCCGTTGCGTGAGAGAAGGGGGAATCGCGTTCAAGAAGGCTCATGGCCGTGAGATTTTTGAGATGGCATCGGAGGGCCCAGAATTCAACAAGCTCTTCAATGATGGGATGGCGTGTACCGCTACGATCGTGATGACGACGATCGTAAGAGAATATAAGAACGGGTTCGAGAGCATTGAATCATTGGTGGATGTGGGAGGCGGGATTGGAGGGGCCGTGTCGGAGATCGTGAAATCTTATCCGCACATCAAGTGTATAAACTTTGATCTGCCGCATGTGGTCGCGACCGCTCCTGATTACGAGAGAGTCACCCATGTTGGAGGAGACATGTTCCAAGCGATTCCCAATGCAGATGCTGTTTTCATGAAGTGGATACTGCATGATTGGAGCGACGAAGATTGCATAAAGATACTGAAGAATTGCAAGAAAGCAATACCAAAAGAGAGAGGGAAGATTATTATAGTGGAGTTTATTCTGAAGCCAGAAGGTGATGGAATGTTCGATGACACAGGCTTGGTCTGTGATTTGCTTATGATTGCACATAGCAGTGGTGGAAGGGAGAGGACCGAGTTGGACTGGAAGAAGCTATTCGATCGAGCTGGGTTCCCTCGTTATAAAATCATCACTATACCAGCTTTGGTATCAATCATCGAGGCTTATCCAATCTGA 1140 0.493 MFRQTILYIKVPGRLVGINHKEEKKTQRKMGEEALMLQGQADIWKFILSFADSMALKSAVELGIPDIIHRHGGPISLSQIIAGLSDAPSPDITCLARIMRLLVRRKIFDAHHPSDGRDTLYGLTHSSRWLLRGSETNLGPLLLMQNHPWLQAPWHYLSRCVREGGIAFKKAHGREIFEMASEGPEFNKLFNDGMACTATIVMTTIVREYKNGFESIESLVDVGGGIGGAVSEIVKSYPHIKCINFDLPHVVATAPDYERVTHVGGDMFQAIPNADAVFMKWILHDWSDEDCIKILKNCKKAIPKERGKIIIVEFILKPEGDGMFDDTGLVCDLLMIAHSSGGRERTELDWKKLFDRAGFPRYKIITIPALVSIIEAYPI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0327 379 Gene3D - 25 130 IPR036388 -
Dere07g0327 379 PIRSF O-mtase 20 379 IPR016461 GO:0008168
Dere07g0327 379 Pfam O-methyltransferase domain 154 359 IPR001077 GO:0008171
Dere07g0327 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 377 IPR029063 -
Dere07g0327 379 Pfam Dimerisation domain 54 103 IPR012967 GO:0046983
Dere07g0327 379 Gene3D Vaccinia Virus protein VP39 132 379 IPR029063 -
Dere07g0327 379 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 44 378 IPR016461 GO:0008168
Dere07g0327 379 FunFam O-methyltransferase family protein 132 377 - -
Dere07g0327 379 PANTHER O-METHYLTRANSFERASE 37 363 IPR016461 GO:0008168
Dere07g0327 379 SUPERFAMILY "Winged helix" DNA-binding domain 34 134 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0327 Dere-ChrDere07 6218844 6220463 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0327 54 375 Monolignol Biosynthesis Gene Families AT5G54160 41.896 2.01e-84 259