Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0322 ATGACCCATCACCTCGTTTCTTCTCTGCTGAGTATTTCTACGTCAGATTACATGGTGTTATCTACTATGCCCAATTCTGGTTTGTTTAGATATGTCCTGGAAGAGAACTCATTTGCCAGTAGACAGCAACTTTCATCAGATGAGGAGATTGGACGAGACTTATATGTCCGAGTTGCAGCATCTGAGATGGAGGAAAGTAGGAATAAGAGGGCTACTACTTGGGTTGTAGTAATTGTGGTGCTTGTTTCTCTTGCTGGCTTTTTTATCATGCTCAAAATTATGTGGATGAAACTATATGCAGTGGGTATTGGTATTTTGGATTGGGCAAAGAGATACAATATTGCACTTGGAACTGCAAAAGGATTAGCTTGCCTGCATGAATCATGTAGAGATTGCATTATCCACTGTGATATCAAGCCAGACAACATTTCGTTGGATGCTGACTTTAACGCAAAAGTTGCTGATTTTGGTCTTGCTAAGCTCTTAGGCAGAAACTTCGAACAGGTTCTTACTACCGTGAGAGGAACCAGAGGCTATCTTGCACCAGAATGGTGTATTCAAGATCGTGAGAAAGATAGGCCAACCGTGACTCTGGTGATTCAAATTTTGGAAGGAGTTCTTCATGTCGGTGTCCCTCCAATTCCACAGTTTTTCCGGTCACTTGCTGAAGAGGCAGTTAGAGTGATCGACTATTTCAACGATCACATTGCCATTCAAGTGCAGGAAAGTAATAGTTCTCAAAACCTCACCATTAAACAAGATGGTTACATAGAAGTAGAGATGAACTACTACCCACATGCTTCCTTTGCAACAAACAACAATCAATCATATTACTGGGCTTATTCTGCCGTCTATCCATCTAGTATGGTTAGATTAGTGCTGGATGTATCTGGACAGTTAAACCTGTTTGTATGGTGGAAGGGTCTCCAACGGTGGAAATTGATCCCTTCGTCACCAACAGGATACCCAGACTGTTCCTGTGGAGATTTTACGATCTGCAGTTACAACATTACGTTGAAAATGGAATGCCGTTGCGTAGAAGGATTTGTATACGACCATCGAGACATTTATGCTTATGGATATAGATGCACGAGGGAAGCTCCATTGCATTGCACTAACGGAACCAACGACAAGTTTTCGATTATACCCAGTATACGTTATCCATTAAATCCACGTTTGTACAAAGTCAGTAATTCTGGTGATTGCCAATTGCGATGCTTAGTGGATTGTGATTGTAGTGCTCATGCATATCAAAACGACACATGCTTCATTTGGAACGGAACATTTTCTAGTCTACATCAACTTTCATCAGAAGAGGAGATTGGAGGAGATTTTTATGTTCGACTCGCAGCATCCGAGATACAGAAGAGTGGAAGTATGAAGCATATTATGATTCTTGTCATTTTAATATCTGGGCTGGTTTCTCTCTCTGGCATAAGTATCATGCTATTCATTATGTGGAGGAACTTTCACAGAGGTTCCTTGGAGGTAATGGGTGACACCTTGATGCATTTCAAGCACCAGGACTTGCGAAAGGCAACAAAGAACTTCACACAGAAGCTAGGGGAAGGTGGTTTCAGTATTGTTTACAAAGGGGAATTGCTGTCTGATTCATCATTGATTGCAGTGAAGCAACTAAGAGGTCAAATTTATGGCGATAAGCAGCTTCGAGCAGAAGTGGGCACAATCGGCATAGTCCAACACAAAAATCTAGTTCGTCTGAGAGGCTTTTGTTTAGAGCGTTCAAAAAGATACTTGGTGTATGATTACATGCCAAATGGTTCTCTAGAATCTCATCTGTTCAAAGTGCGTACTAATTTTTTGGATTGGGCAACAAGATACAATATTGCAATTGGGACTGCAAAAGGATTAGCTTACCTGCATGAATCCTGTAGAGACTGCATCATACATTTGCTTCTTGAAATTATTTCTGGTAAAAGAAACATGGACCTGCCAAATGATGAATTAACTAACTACTTTCCTGCACTGGTTTTGAATGCATTAAACAATGGGGGAGAAGTGGCGACACTGGTAGATCCCATATTAGAAGGTGAAGTGAACGTGGAAGAGTTAACAAGAGCATGCAAGGTTGCATGTTGGTGCATTCAAGATCATGAGCAAGATAGACCAACCATGGCTCAGGTGATTCAAATTTTGGAAGGAGTTCTTCAAGTGAGTATCCCTCCAACTCCACAGTTTTTCCTGTCCCTTGCAGAAGCTTATGTGACTGATATGCCTCTAGAAGAAATGGCTCCTGCTTTAAATGATCCCTCCTGA 2277 0.4128 MTHHLVSSLLSISTSDYMVLSTMPNSGLFRYVLEENSFASRQQLSSDEEIGRDLYVRVAASEMEESRNKRATTWVVVIVVLVSLAGFFIMLKIMWMKLYAVGIGILDWAKRYNIALGTAKGLACLHESCRDCIIHCDIKPDNISLDADFNAKVADFGLAKLLGRNFEQVLTTVRGTRGYLAPEWCIQDREKDRPTVTLVIQILEGVLHVGVPPIPQFFRSLAEEAVRVIDYFNDHIAIQVQESNSSQNLTIKQDGYIEVEMNYYPHASFATNNNQSYYWAYSAVYPSSMVRLVLDVSGQLNLFVWWKGLQRWKLIPSSPTGYPDCSCGDFTICSYNITLKMECRCVEGFVYDHRDIYAYGYRCTREAPLHCTNGTNDKFSIIPSIRYPLNPRLYKVSNSGDCQLRCLVDCDCSAHAYQNDTCFIWNGTFSSLHQLSSEEEIGGDFYVRLAASEIQKSGSMKHIMILVILISGLVSLSGISIMLFIMWRNFHRGSLEVMGDTLMHFKHQDLRKATKNFTQKLGEGGFSIVYKGELLSDSSLIAVKQLRGQIYGDKQLRAEVGTIGIVQHKNLVRLRGFCLERSKRYLVYDYMPNGSLESHLFKVRTNFLDWATRYNIAIGTAKGLAYLHESCRDCIIHLLLEIISGKRNMDLPNDELTNYFPALVLNALNNGGEVATLVDPILEGEVNVEELTRACKVACWCIQDHEQDRPTMAQVIQILEGVLQVSIPPTPQFFLSLAEAYVTDMPLEEMAPALNDPS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0322 758 ProSiteProfiles Protein kinase domain profile. 1 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0322 758 SUPERFAMILY Protein kinase-like (PK-like) 502 738 IPR011009 -
Dere07g0322 758 Pfam S-locus glycoprotein domain 257 350 IPR000858 GO:0048544
Dere07g0322 758 Pfam PAN-like domain 371 430 IPR003609 -
Dere07g0322 758 FunFam S-receptor-like serine/threonine-protein kinase 487 590 - -
Dere07g0322 758 Gene3D Transferase(Phosphotransferase) domain 1 639 727 - -
Dere07g0322 758 Gene3D Transferase(Phosphotransferase) domain 1 101 192 - -
Dere07g0322 758 Gene3D Transferase(Phosphotransferase) domain 1 591 638 - -
Dere07g0322 758 ProSitePatterns Protein kinases ATP-binding region signature. 521 544 IPR017441 GO:0005524
Dere07g0322 758 Pfam Protein tyrosine and serine/threonine kinase 517 630 IPR001245 GO:0004672|GO:0006468
Dere07g0322 758 SMART serkin_6 515 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0322 758 FunFam Os07g0541700 protein 99 176 - -
Dere07g0322 758 Pfam Protein kinase domain 110 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0322 758 ProSiteProfiles Protein kinase domain profile. 515 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0322 758 CDD PAN_AP_plant 368 450 - -
Dere07g0322 758 SMART ntp_6 374 449 IPR003609 -
Dere07g0322 758 SUPERFAMILY Protein kinase-like (PK-like) 102 188 IPR011009 -
Dere07g0322 758 ProSiteProfiles PAN/Apple domain profile. 371 450 IPR003609 -
Dere07g0322 758 Gene3D Phosphorylase Kinase; domain 1 484 590 - -
Dere07g0322 758 PANTHER OS07G0415500 PROTEIN 638 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0322 Dere-ChrDere07 6171933 6179979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0322 497 637 Trihelix Transcription Factor Family AT1G70460 50.000 3.30e-34 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere07g0322 PK_Tyr_Ser-Thr 6.5e-17 CL0016