Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0316 ATGTTATTGATGCTCGCGGTGTCACCTTTGAGGAGAACCAAAGATGAAATTGAAAACCAGGGAGAGATGGACGGTTTCTCAATCATCGGCGGCACTGGTGACGGCGACTTTGAAGAATTTTCCGATGGGAATTTATTGGAAAGCATCAACTTTGACGATCTTTTTGTTGGAATCAACGTCGCCGGAGCCGTGTTGCCGGATTTGGAGATGGACCCGGAGATCCTCGCCGAGTTCTCCGTGGAATCGTCGGAGAATATGAACTCCTCCTCGGTTTCGATGCAAAAGAACGATGATGGAGCTGATCACCAGATCAATATTACAACGACTACGAACAAAGAAAAAGAAGAAGAAGAAGAAGACGAAGAAGAAGATTTTAATAATAAAGTAATTTCTTCAGGTTCGGGTTCAAACTCTGGGTCAAGTCAAGGAGGAGGAGAAGAGATAGTGAGCAAAAGAGATGAAACGGCGACGACGTTGGAGCCATCGCCGAAGGAAGGTGACAAAGGGAGAAAATCATCAGCTCAATCCAAAAATTCACAAGGGAAGAGAAAAACGAAGGTGGATTGGACCCCAGAATTGCACAGACGATTCGTGCAAGCAGTGGAGCAGCTAGGAGTGGACAAGGCAGTGCCTTCCAGGATTTTAGAGGTTATGGGAATTGGCTGTCTGACTCGCCATAACATTGCCAGCCATCTCCAGAAATATCGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCAGAAGCAGCGAGGTGGAGTAAGAGGAGAGAGATGTATGGAGGAGGAGGAGGAGAGAAGAGAACAGAGGTAAGAAGCCCTTGGGTAGCACCCACCTTGGGTTTTCCTCAAATGGCTGCTCCGATGCACCACTTTAGACCCTTACATGTGTGGGGCCATCCCACCATGGACCTCTGCATGCCCATGTGGCCTAAACATCATCATCTTCCTCATCCGCTCTTGCCGCCACCGCCCGCCTGGCCGGGAGCGACGACTCCGCCACCTCCAGACCCTTCTTTCAGCTGGCACACTCACCTCCTACAGGCCGATTCGAATGCACTGACCGCAGGAACAGGAACACATTGTTTTCTACAACCTCTGACTACCACGAGACTTGGATCTCCACCTGTCCCTGGCATCCCACCCCATGCCATGTTCAAGGTTGATTCTGGAATCGGCGTCCCCGCGGGGCCACTCGGCCACCATCCCTGGCCGGTCTTCGACTTTCTCCCGTCCAAGGAAAGCATAGACGCAGCTATTGGAGATGTTTTATCAAAGCCATGGCTACCACTCCCTCTTGGCCTGAAAGCTCCGGCACTTGATAGTGTGTTGGGTGAATTACAGAGACAAGGGATTGCAAAAATTCCACCCTCTTGTGCTTGA 1380 0.5051 MLLMLAVSPLRRTKDEIENQGEMDGFSIIGGTGDGDFEEFSDGNLLESINFDDLFVGINVAGAVLPDLEMDPEILAEFSVESSENMNSSSVSMQKNDDGADHQINITTTTNKEKEEEEEDEEEDFNNKVISSGSGSNSGSSQGGGEEIVSKRDETATTLEPSPKEGDKGRKSSAQSKNSQGKRKTKVDWTPELHRRFVQAVEQLGVDKAVPSRILEVMGIGCLTRHNIASHLQKYRSHRKHLLAREAEAARWSKRREMYGGGGGEKRTEVRSPWVAPTLGFPQMAAPMHHFRPLHVWGHPTMDLCMPMWPKHHHLPHPLLPPPPAWPGATTPPPPDPSFSWHTHLLQADSNALTAGTGTHCFLQPLTTTRLGSPPVPGIPPHAMFKVDSGIGVPAGPLGHHPWPVFDFLPSKESIDAAIGDVLSKPWLPLPLGLKAPALDSVLGELQRQGIAKIPPSCA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0316 459 NCBIfam myb-like DNA-binding domain, SHAQKYF class 184 238 IPR006447 GO:0003677
Dere07g0316 459 FunFam Two-component response regulator 180 243 - -
Dere07g0316 459 MobiDBLite consensus disorder prediction 109 188 - -
Dere07g0316 459 Pfam Myb-like DNA-binding domain 187 236 IPR001005 -
Dere07g0316 459 Gene3D - 181 242 - -
Dere07g0316 459 PANTHER TRANSCRIPTION ACTIVATOR GLK1 4 458 IPR044825 GO:0003700|GO:0045893
Dere07g0316 459 MobiDBLite consensus disorder prediction 128 145 - -
Dere07g0316 459 SUPERFAMILY Homeodomain-like 182 241 IPR009057 -
Dere07g0316 459 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 181 240 IPR017930 -
Dere07g0316 459 MobiDBLite consensus disorder prediction 147 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0316 Dere-ChrDere07 6118011 6121862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0316 39 312 G2-like Transcription Factor Family AT5G44190 43.321 5.09e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere07g0316 Myb_DNA-binding 1.4e-08 CL0123