Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0314 ATGGAGGCTGGTTCAGAAGGAGAGAAGAAGAAGCCACCTGAGGGAGAGAACAAGACCAAGCGCAAAATGAAGACTGCTTCCCAGTTGGAGATTCTGGAAAAAACCTATGCCGCTGAGCCGTACCCGTCCGAGGCATTACGAGCAGAGCTATCGGCGAAATTGGATCTTTCGGATCGCCAACTGCAGATGTGGTTCTGTCACCGTAGGTTAAAGGACAGAAAGGCACCGGCGGCGAAGAAGCCGCGAAATGAATCGCCACCTGGAGTGGTGACTCAGGCGCCAGTGGGTGATGGTGTTGAGCATAAGGTAATGGGTGATGTCGGGCATGAGCGTGGTTCCATTTCTGGGTTGAGGCCATTCAGTCATACGGATTCACGGCGAGTTGTCCCACGACCTGGGATGGCCTTTCCTAGGGTTGGAGTTCAATTGCCAGCAATGGAGAGTTATTATGAGCCACATCAGTCCGTAGCTGAACCGAGAGCTATTGCATTCGTGGAAGCACAGTTAGGGGAGCCACTAAGAGAGGATGGGCCAATATTGGGGATGGAATTTGATCCCTTGCCACCGGGTGCTTTTGGTGCACCAATAGGTCCAAGTGTCATGGGGCAGCATAGGCAGTCAGGAAAGCCTTTTGAGGCAAAAATTTATGAACGGATGGATAAGGGTGTTTCAAGGACTCTCCATGAATATCAATTTATTCCAGAGCAGCCAACTGTTAGAAATGAGACATATGACTATGAGAGAGTTGCCCCTTCTAACTACTACGGTTCTCTTGATGGAATTCCACATGCAAGGACTTTATTATCCAGTGGGCGACCATTCCTTAATGGGAATGAAATTGCTTCCAATGGATATGGTTATCAAGGTCAAATGCCAGGGTTAAGTTTATCGTCTCAACAAGGCAGGCAAAATCATCTTTTGCCTTCTGCTTCTGGAGAGAATGATAATGTTCCATGGAAGAAACTGTATGTTGACATGCCTGTCGACACTCATATCGGGCCTCACCCAGAAACTCAGATTGACAATGCATTAATGCCATCTGACCGAAAAGATATCCATGAGGAGGAAATTTCACGCTTTCAGAGGAAGCGGAAGAATGAAGAGGCTAGAGTGCAACGGGAACTTGAGGCACAAGAGAAAAGAATCAGAAAAGAACTTGAAAAACAGGATATTTTAAGGAGAAAGAGGGAAGAGCAGGTAAAAAAAGAGATGGAGAGGCATGAGCGTGAAAGGCGGAAAGAAGAGGAAAGGCTATTGCGTGAAAGACAGCGAGAGCAGGAGAGATACCAAAGAGAACAAAGGCGTGAACTGGAAAGGAGGGAGAAGATTTTGCAGAAAGAGTCGATCCGAGCTGAGAAAAGGAAACAGAAGGAAAAAATACGCAGAGAGAAAGAGGCAGCAAGGATCAAAGCAGCCAATGAGAGAGCTATTGCTCGTAGAATGGCCAAAGAATCAATGGAACTGATTGAAGATGAACGGCTGGAATTGATGGAGTTAGCTGCATCAGAGAAGGGGCTTTTTTCAATTCTGTATCTTGACTATGAAACTTTGCAGAATCTTGAATTATTTAAAGATGGGCGGCCTTCATTTCCTCCTAAGTCTGTACGGTTGAAAAGACCTTTCTCAATTCAACCTTGGTTGGATTCTGACAAGAACATAGGAAATCTTTTGATGGTTTGGAGGTTTTTGATCTCCTTTGCAGATGTTCTTGGGATGTGGCCGTTCACCTTGGATGAATTTTTACAAGCTTTACATGACTATGATCCAAGGTTGTTAGGTGAGATTCATGTTGCCCTTCTGAGATCCATTATGAAAGATATTGAAGATGTTGCAAGAACACCAACTGGGTTAGGAGTTAATCATAACAGTGCTGCCAACCCTAGTGGGGGTCATCCACAAGTAGTTGAAGGAGCATATGTGTGGGGTTTTGATATAAGAAATTGGCTGCAACATTTAAATCCATTAACATGGCCAGAAATCATGCGGCAATTCGCTTTGTCAGCAGGATTTGGGCCACGATTGAAGAAGAGGAATATTGAGCAGGTGCATCCTTGTGACAACAATCAGGGTATTGATGGTGAAGATATAATTTCTGTTCTACGGAGTGGGGCAGCAGTTGAAAATGCCGTTGCTATCATGCAAGAAAGGGGTCTATCTAACCCAAGAAGATCTAGGCATCGCTTGACGCCTGGAACTGTTAAGTTTGCAGCATATCATGTCCTGTCTCTTGAAGGAAACAAGGGTCTTACCATATTGGAAGTTGCAGACAAGATTCAGAAATCTGGGCTCCGTGATCTTACAACAAGCAAAACTCCAGAGGCGTCTATAGCTGCTGCTTTGTCCAGGGACACAAAGCTTTTTGAAAGGATAGCTCCGTCGACATATTGTGTACGTCCTGCATATAGAAAGGACCCGACTGATGGTGAGGCAATCCTCTCGGCAGCCAGGGAAAGAATCAGGATATTTAAGAATGGATTTGTTGATGCAGAAGAACCAGATGATGGTGAAAGGGATGATGATTCTGAAATTGATATGGCAGAAGATCCTGAGGTTGATGATTTAGGTACTGAAACAAATAATAAGAAGGAGGCTCCTGACTTGGAATTGAGTTTGAACACTGTAGTTAAGAATAGAGAGGGAAGTGCTGAAACTTTGCGAACTCCTGATGGTGGCCATGGGCAAATGAATGAGGGTTCAGCTTCAATTGTTGCTGAAGCATTTAATCAAGAAATTGTTGGTAGTAGCAAAGATGTAACTAATCCTGATCTGGAAGACACCAACATTGATGAAAGTTATCCAGGTGAACCATGGGTTGAAGGGCTGATGGAAGGAGAGTACTCGGATCTTAGTGTTGAGGAGCGACTTAATGCTCTTGTTGCTTTGATTGGTGTGGCAATTGAAGGAAATTCAATTCGTGTTGTTCTTGAGGAACGTTTAGAAGCAGCAAATGCTTTAAAGAAGCAGATGTGGGCAGAGGTACAGCTTGATAGACATCGAATCAAAGAGGACTACTATTCTAAGATGCAGTCTGTTCCTTTTATAGGCAATAGGAATGAACCAACTCCAACAATTTCATCAATAGAGGGTAAACTAAGCCCTTTGCTTAATGTGGATGACAAAAATGACGAGGCATTATTAGCTCCCCTTACTCAGCAAGTGCAGCTAAATGATCTACCAGACAATCAGACCCATCTTCAAAGTGTCCCATTGGAAGTGAACAAGCAAATGCAAGAATCTGCTGTCCCAGATAATATTTTTTACCAGCAATTTGGATGTGGTGCTGAAAAGTCAAGATCAAATTTCAAATCATACATTGGTCAATTGGCAGAAGAAACTTATATGTATAGGTCATTGCCTCTTGGGTTGGATCGGAGACGTAATCGATACTGGCAGTTTGTTACATGTGCTTCTCAAAATGATCCAGGTTGTGGCAGAATTTTTGTGGAGATGCATGATGGTCATTGGAGGCTGATTGATTCTGAAGAGGGTTTTGATGCTCTCTTGGCATCATTGGATGTACGTGGGATCAGGGAATCCCATTTGCACATGATGTTGCAACGAATTGAGATGTCCTTTAAGGAATCTGTTAGGAGGAATAACTTGAGAAGGCAAGATGGAGACACTGTCGATTCAGAAGCTTTTCAAATGGCTAATGAGCATGATTGCTGTGCTTCTTTGCGCATTACTAATTCAGATGTGTCAGAGACCTCAACATCTTTTGAGGTTCAGCTTGGAAGGAATGATTCTGACAACAAAGATGCTTTTAGGAGATACCAGGATTTTGAGAAGTGGATGCTGAAGGAAGGCTTAAATTCGTCAGTATTATGTGCAATGAGGGTTGGGAAGAGAAGGTGCAGCCAATTGCTGGGCATGTGTGATTACTGCCATGAAATCCATTTATCTGAAGAAATCCCATGTCCTTCCTGCCATAGAACTTTTCGTACTTGTAAGAATAACTTAAGCTCTTCTGAACGTATGGCTTACTGTGAAAGAAAGGTGAAGATTGCCACAGATAATATATTTAATGTCTCACCTTCTTCACCGTTGAGGATGAGATTGCTCAAAGTGCTGCTGTCCATTGTTGAGGTTTCCATTCCTGAAGAAGCTCTAAAACCTCTTTGGACTGACAATTACCGGAAATCTTGGATTGCAAAGCTGCATTCTTCTTCATCCACGGAAGAACTTCTTGAGATGTTGACTATACTGGAGGGTGCTATAAAGAGGGATTATTTGGCTTCAAACTTCAAGGCTACCAGTGAGCTGTTGGGTTCTGTTTTCTCTTCTGAATGTCATAGTGATTCCATAGTAGAAAGAATTCCTGTACTGCCGTGGGTGCCTCATACAACTGCTGCTGTGGCGCTAAGGCTCTTGGAACTTGACATCTACACCTTTTACACCTTAGAGCAGAAGCTGGAGTTTGAGAAGGACAAGACAAACGAGTATGTTATGAAGTTATCTTCAAAATATGCTTCTGCCAAGAATCCCCAAGATGCTGCTGCAACTGAGACAACTCATCTGGATGGGCGTAACTTGGTTGATCTAGGTGCTGGATTTGCAAGCTACAGTCGAGGACAAAGGTCCCGTGGACCGGGCCGTGGATGTTCTCGTAGCAGGAGATCACAGGAGAGGATCGTTAATTCGAGATCTGAAACCAGAAAGACAGTTTCTGCTACTGGCAGCAGGAGACTTGGACAGGTACTAAAATGGAAAGGGAAATCACGTGGCCGTGGGGGACATTGTCGGGCACGTCGAAGCATTAGAAGCAACAGGCAAAAACCAGCAGCTAAGGTGCATGAGATAGGTGGCAAGAGGGTTGCTTCCAAAGAGGAATCAGGTGGTAATTTTGTCAGGCAGGAAACCAATGAAGCTGAAACCATTGGTTTTCAAATTGAAGCTGCTGAAAGTGCTAGCAGTTCGGGAAGATCAGACTATGAGGAAGATAATTATCGAGTAACAGGTAACGAGTATGATTATCTGGTGGATAATAATGACAATGGCTGTGGGGGTGGATTTAGTGGGAAGTCTGAGAACATAGTTGAAGGGAGTGATTTTAATATAGATGATGAGGAAGATGTAGATATTGATGAGGACGAGGATGATGGACAGGTTGATATTGAAGACTTCATAAATGGGGATTCAGATATAGGGGAGAACGAAGAAGATGCAGAGCAAAACATGGATCCAGATGGATCAAACTCTGCATCCTCAGAGTACAGTGATTAA 5223 0.4377 MEAGSEGEKKKPPEGENKTKRKMKTASQLEILEKTYAAEPYPSEALRAELSAKLDLSDRQLQMWFCHRRLKDRKAPAAKKPRNESPPGVVTQAPVGDGVEHKVMGDVGHERGSISGLRPFSHTDSRRVVPRPGMAFPRVGVQLPAMESYYEPHQSVAEPRAIAFVEAQLGEPLREDGPILGMEFDPLPPGAFGAPIGPSVMGQHRQSGKPFEAKIYERMDKGVSRTLHEYQFIPEQPTVRNETYDYERVAPSNYYGSLDGIPHARTLLSSGRPFLNGNEIASNGYGYQGQMPGLSLSSQQGRQNHLLPSASGENDNVPWKKLYVDMPVDTHIGPHPETQIDNALMPSDRKDIHEEEISRFQRKRKNEEARVQRELEAQEKRIRKELEKQDILRRKREEQVKKEMERHERERRKEEERLLRERQREQERYQREQRRELERREKILQKESIRAEKRKQKEKIRREKEAARIKAANERAIARRMAKESMELIEDERLELMELAASEKGLFSILYLDYETLQNLELFKDGRPSFPPKSVRLKRPFSIQPWLDSDKNIGNLLMVWRFLISFADVLGMWPFTLDEFLQALHDYDPRLLGEIHVALLRSIMKDIEDVARTPTGLGVNHNSAANPSGGHPQVVEGAYVWGFDIRNWLQHLNPLTWPEIMRQFALSAGFGPRLKKRNIEQVHPCDNNQGIDGEDIISVLRSGAAVENAVAIMQERGLSNPRRSRHRLTPGTVKFAAYHVLSLEGNKGLTILEVADKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERIAPSTYCVRPAYRKDPTDGEAILSAARERIRIFKNGFVDAEEPDDGERDDDSEIDMAEDPEVDDLGTETNNKKEAPDLELSLNTVVKNREGSAETLRTPDGGHGQMNEGSASIVAEAFNQEIVGSSKDVTNPDLEDTNIDESYPGEPWVEGLMEGEYSDLSVEERLNALVALIGVAIEGNSIRVVLEERLEAANALKKQMWAEVQLDRHRIKEDYYSKMQSVPFIGNRNEPTPTISSIEGKLSPLLNVDDKNDEALLAPLTQQVQLNDLPDNQTHLQSVPLEVNKQMQESAVPDNIFYQQFGCGAEKSRSNFKSYIGQLAEETYMYRSLPLGLDRRRNRYWQFVTCASQNDPGCGRIFVEMHDGHWRLIDSEEGFDALLASLDVRGIRESHLHMMLQRIEMSFKESVRRNNLRRQDGDTVDSEAFQMANEHDCCASLRITNSDVSETSTSFEVQLGRNDSDNKDAFRRYQDFEKWMLKEGLNSSVLCAMRVGKRRCSQLLGMCDYCHEIHLSEEIPCPSCHRTFRTCKNNLSSSERMAYCERKVKIATDNIFNVSPSSPLRMRLLKVLLSIVEVSIPEEALKPLWTDNYRKSWIAKLHSSSSTEELLEMLTILEGAIKRDYLASNFKATSELLGSVFSSECHSDSIVERIPVLPWVPHTTAAVALRLLELDIYTFYTLEQKLEFEKDKTNEYVMKLSSKYASAKNPQDAAATETTHLDGRNLVDLGAGFASYSRGQRSRGPGRGCSRSRRSQERIVNSRSETRKTVSATGSRRLGQVLKWKGKSRGRGGHCRARRSIRSNRQKPAAKVHEIGGKRVASKEESGGNFVRQETNEAETIGFQIEAAESASSSGRSDYEEDNYRVTGNEYDYLVDNNDNGCGGGFSGKSENIVEGSDFNIDDEEDVDIDEDEDDGQVDIEDFINGDSDIGENEEDAEQNMDPDGSNSASSEYSD 1740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0314 1740 Pfam Homeodomain 18 74 IPR001356 GO:0003677
Dere07g0314 1740 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 934 976 IPR028942 -
Dere07g0314 1740 Coils Coil 350 475 - -
Dere07g0314 1740 SMART HOX_1 17 79 IPR001356 GO:0003677
Dere07g0314 1740 MobiDBLite consensus disorder prediction 1686 1740 - -
Dere07g0314 1740 CDD homeodomain 18 74 IPR001356 GO:0003677
Dere07g0314 1740 MobiDBLite consensus disorder prediction 1592 1606 - -
Dere07g0314 1740 MobiDBLite consensus disorder prediction 398 432 - -
Dere07g0314 1740 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 4 1740 IPR044977 GO:0006357
Dere07g0314 1740 SUPERFAMILY Homeodomain-like 13 74 IPR009057 -
Dere07g0314 1740 MobiDBLite consensus disorder prediction 915 936 - -
Dere07g0314 1740 Pfam HB1, ASXL, restriction endonuclease HTH domain 731 798 IPR007759 GO:0006355
Dere07g0314 1740 MobiDBLite consensus disorder prediction 73 95 - -
Dere07g0314 1740 ProSiteProfiles HARE-type HTH domain profile. 731 800 IPR007759 GO:0006355
Dere07g0314 1740 Gene3D - 2 77 - -
Dere07g0314 1740 MobiDBLite consensus disorder prediction 1567 1591 - -
Dere07g0314 1740 MobiDBLite consensus disorder prediction 110 131 - -
Dere07g0314 1740 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1116 1188 IPR028941 -
Dere07g0314 1740 SMART testlast3 550 609 IPR018501 -
Dere07g0314 1740 MobiDBLite consensus disorder prediction 826 862 - -
Dere07g0314 1740 MobiDBLite consensus disorder prediction 831 853 - -
Dere07g0314 1740 ProSiteProfiles 'Homeobox' domain profile. 15 75 IPR001356 GO:0003677
Dere07g0314 1740 MobiDBLite consensus disorder prediction 1 26 - -
Dere07g0314 1740 MobiDBLite consensus disorder prediction 1535 1549 - -
Dere07g0314 1740 ProSiteProfiles DDT domain profile. 550 609 IPR018501 -
Dere07g0314 1740 Pfam DDT domain 552 606 IPR018501 -
Dere07g0314 1740 MobiDBLite consensus disorder prediction 1521 1614 - -
Dere07g0314 1740 MobiDBLite consensus disorder prediction 1686 1726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0314 Dere-ChrDere07 6063975 6076813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0314 1 1738 Homeobox Transcription Factor Family AT5G44180 47.299 0.0 1364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Dere07g0314 WSD 3.9e-14 No_clan