Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0313 ATGGCCATGCTTCCTTTTTGGTTACTTAAATCCCACGTTCCCACTTGCCGGAAACCAGACGCGAAGCGAAGCGAAGCAGTCCCTCTCCTTTTTCCCACGATGCTTCTGCTCCTTCTACTCTTCTTTCTCTCTCCTCCACCCCTCACTCTCTCTCTAAACCAAGACGGTCTCTTCCTACACCAAGCCAAGCTTCGACTCTCCGACCCTTACAATGCCCTTTCCACCTGGAACCCCCGTGACGCCACCCCCTGCAAGTGGTTCGGCGTCACGTGCGACCCACTCTCCGGCGACGTCACTTCTCTCAACCTCACCAACTCACAGCTTGAGGGACCCTTCCCTACCGTCCTCTGCCGCCTTCCTTCGCTCGCATTCCTCTCCTTCTACAACAGCATGATCAACTCTTCTCTCCCCGCCGATATCTCCAACTGTAGTCATCTTCAGTATCTCGACCTCTCCCAGAACGCCCTCGTGGGCCCCATCCCGGAGACGCTCTCGCAAATTCCGAATCTCCGGTATCTGGACCTCTCTTTCAATAACCTCTCCGGCGATGTTCCCGTGAGTTTTGGTAAGTTCCGGCGACTGGAATCGCTTAAAATCGTTTATAATCTGCTGAACGGAACAATACCGGGTTCTCTTGGTAACATTTCCTCCCTCAAAGTGCTTCATCTTGCTTATAATCCCTTCACTCCCAATCCCATACCGGATAAATTCGGTAACCTGGTGAATATAGAGCAATTATGGCTCGCTTCGTGTAGCTTCGTGGGTTCCATTCCGGCATCGTTGGGCCGTCTTACTCGGCTCCAGAACCTCGACTTGTCCATTAACAGACTCAATGGGTCTATTCCGGAATCAATTGTGGGGATGAAGAGCGTCATTCAAATAGAGCTTTATGAGAATTGGCTCTCAGGCAAATTACCTGCAGGAATGTCGAACTTGACGAATCTGAAACGATTTGATGCGTCGGTGAATAATTTGACTGGGACGATTCCTGATGAATTGTGCCGGTTGGCGCTCGAATCTCTTAATTTGTACAATAATCAACTTGAAGGGATTTTGCCAGAGAGTATAGCTCTGTCTCGGAATTTGCACGAGCTCAAATTGTTTAACAACACGCTTAGAGGGAGGTTGCCGAGTGCCCTCGGTAAAAACTCGCGCCTCGTGAATCTTGACGTTTCGTATAATCAGTTTTCTGGTGAAATACCGGAGAATTTGTGTGGAGGCGGCGTGTTAGACAACGTGATTTTGATATACAATTCATTTTCTGGGAAAATTCCTGAGAGTTTGGGAAATTGCATGAGTTTAACCAGGGTTCGGCTTAGGAATAACAACCTCTCAGGCATGGTTCCTGGTGCTTTCTGGGGTCTACCTCATCTGTATTTGCTCGAGCTTATTCATAATTCTTTATCTGGGCAAATTTCCAGCGCAATGTCTGGTGCTCGTAATCTGTCACTATTGTTAATTTCGGACAACCAGTTTTCTGGGTCGATACCTGATGAGATTGGGTCGTTGAATAATCTTGTTGAATTTGATGGCAGCCAAAATAATTTTACGGGTCAGATTCCAGCCAGTATGGTCAAGTTGAGCCAGTTGGGCAAGCTTGATCTCAGTGATAATAAACTTTCTGGGGCAATTCCAGGAGGAATTAGTGAATGGAATAAACTAAATGAGCTTAACTTGGCAAACAATAGGCTCGATGGGGGAATCCCAAACAAAATTGGGAGCTTGCCAGTGCTTAATTATCTTGATCTCTCTGGCAATCGGTTCTCTGGTGAAATTCCACCCCAGTTGCAAAATCTGAAGCTCAATTTGCTGAATTTGTCGAACAATCAGCTTTCTGGGGAAATTCCTCCTCTTTATGATAATGAGAATTATAGAAATAGTTTTCTAGGGAATCAAGGCCTCTGTGGTGATCTCTATGGGCTTTGTCCAAGCTTTGGTGAAAGTAAGAACCGGAGGTATCTGTGGGTTTTCCGGTCAATCTTTATACTCGCTGGTATTGTTTTTGTTGTTGGGGTGGCATGGTTTTACTTGAAATACCGAAACTTCAAGAAGTTGAAAAAAGGATTTAACATGTCAAAGTGGAGGTCATTTCACAGGTATAGCTTCAGCGAGTTTGAGATTGTTAAATTGCTGAATGAAGATAACATAATAGGGAGCGGAGCATCTGGGAAGGTCTATAAAGTAGCGCTAAGCAATGGCGAGGTAGTAGCTGTGAAGAAACTCTGGAGGGCAACTAAGAAAGAAGATGGAAGTGTTGGTTCTGGAAAAGATGAATTCGAAGTTGAAGTTGAAACATTGGGAAAGATCCGACACAAGAATATTGTTAGGCTATGGTGTTGCTGCAACAACGGGGATAGCAAGCTTCTAGTTTATGAATATATGCCAAATGGAAGCTTGGCTGATATATTGCACAGCAGCAAGAAAAGCTTGTTGGATTGGCCAACCAGGTATAAAATTGCTATTGATGCTGCTGAGGGACTTTCTTACTTGCACCACGATTGTGTCCCACCAATTGTTCATAGGGACGTAAAATCTAACAATATATTGCTAGATGAAGAGTTTGGGGCAAAAGTTGCAGATTTTGGAGTTGCCAAAATGTTTAGGGGAGTCAGCCAAGGCACAGAATCGATGTCTGTCATTGCCGGATCTTATGGTTACATTGCACCAGAATATGCCTATACTCTTCGGGTCAATGAAAAGAGTGATATTTATAGCTTTGGCGTGGTTATTCTGGAATTGGTAACTGGGAAACCCCCCATTAATTCAGAGTACGGAGAAGAAGATATGGTGAAATGGGTTTCCACCACATTGGACCAGAAAGGAATAGACCAAGTGATTGATCCCTGTCTTGATTCCAAATACAAAGAAGAAATCACCAAAGTGCTTAGTGTGGGCCTTCTTTGTACAAGCTGTCTTCCTATAACTCGACCTTCCATGCGTCGAGTGGTGAAAATGCTGCAGGAAGCTTCTGCAGATTCCAAATCCAGAAGTGTGAAGAAGGATGGAAAACTCTCCCCTTATTATCACGAAGAAGCCTGTGATCCGGAAGCATAG 3054 0.4506 MAMLPFWLLKSHVPTCRKPDAKRSEAVPLLFPTMLLLLLLFFLSPPPLTLSLNQDGLFLHQAKLRLSDPYNALSTWNPRDATPCKWFGVTCDPLSGDVTSLNLTNSQLEGPFPTVLCRLPSLAFLSFYNSMINSSLPADISNCSHLQYLDLSQNALVGPIPETLSQIPNLRYLDLSFNNLSGDVPVSFGKFRRLESLKIVYNLLNGTIPGSLGNISSLKVLHLAYNPFTPNPIPDKFGNLVNIEQLWLASCSFVGSIPASLGRLTRLQNLDLSINRLNGSIPESIVGMKSVIQIELYENWLSGKLPAGMSNLTNLKRFDASVNNLTGTIPDELCRLALESLNLYNNQLEGILPESIALSRNLHELKLFNNTLRGRLPSALGKNSRLVNLDVSYNQFSGEIPENLCGGGVLDNVILIYNSFSGKIPESLGNCMSLTRVRLRNNNLSGMVPGAFWGLPHLYLLELIHNSLSGQISSAMSGARNLSLLLISDNQFSGSIPDEIGSLNNLVEFDGSQNNFTGQIPASMVKLSQLGKLDLSDNKLSGAIPGGISEWNKLNELNLANNRLDGGIPNKIGSLPVLNYLDLSGNRFSGEIPPQLQNLKLNLLNLSNNQLSGEIPPLYDNENYRNSFLGNQGLCGDLYGLCPSFGESKNRRYLWVFRSIFILAGIVFVVGVAWFYLKYRNFKKLKKGFNMSKWRSFHRYSFSEFEIVKLLNEDNIIGSGASGKVYKVALSNGEVVAVKKLWRATKKEDGSVGSGKDEFEVEVETLGKIRHKNIVRLWCCCNNGDSKLLVYEYMPNGSLADILHSSKKSLLDWPTRYKIAIDAAEGLSYLHHDCVPPIVHRDVKSNNILLDEEFGAKVADFGVAKMFRGVSQGTESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPPINSEYGEEDMVKWVSTTLDQKGIDQVIDPCLDSKYKEEITKVLSVGLLCTSCLPITRPSMRRVVKMLQEASADSKSRSVKKDGKLSPYYHEEACDPEA 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0313 1017 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515
Dere07g0313 1017 Pfam Leucine rich repeat 168 227 IPR001611 GO:0005515
Dere07g0313 1017 Pfam Leucine rich repeat 433 492 IPR001611 GO:0005515
Dere07g0313 1017 MobiDBLite consensus disorder prediction 990 1017 - -
Dere07g0313 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Dere07g0313 1017 Gene3D Ribonuclease Inhibitor 232 337 IPR032675 -
Dere07g0313 1017 Gene3D Ribonuclease Inhibitor 50 231 IPR032675 -
Dere07g0313 1017 Gene3D Phosphorylase Kinase; domain 1 693 793 - -
Dere07g0313 1017 SMART serkin_6 711 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0313 1017 Pfam Leucine Rich Repeat 338 356 IPR001611 GO:0005515
Dere07g0313 1017 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 214 988 - -
Dere07g0313 1017 Gene3D Transferase(Phosphotransferase) domain 1 794 1011 - -
Dere07g0313 1017 FunFam Leucine-rich receptor-like protein kinase family protein 233 331 - -
Dere07g0313 1017 ProSiteProfiles Protein kinase domain profile. 711 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0313 1017 FunFam Receptor-like protein kinase HSL1 337 644 - -
Dere07g0313 1017 SUPERFAMILY Protein kinase-like (PK-like) 709 987 IPR011009 -
Dere07g0313 1017 ProSiteProfiles Leucine-rich repeat profile. 600 622 IPR001611 GO:0005515
Dere07g0313 1017 SUPERFAMILY L domain-like 63 401 - -
Dere07g0313 1017 MobiDBLite consensus disorder prediction 993 1017 - -
Dere07g0313 1017 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 794 1003 - -
Dere07g0313 1017 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 52 215 - -
Dere07g0313 1017 Pfam Leucine rich repeat N-terminal domain 53 92 IPR013210 -
Dere07g0313 1017 SUPERFAMILY L domain-like 338 636 - -
Dere07g0313 1017 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Dere07g0313 1017 SMART LRR_typ_2 433 454 IPR003591 -
Dere07g0313 1017 SMART LRR_typ_2 575 598 IPR003591 -
Dere07g0313 1017 SMART LRR_typ_2 312 336 IPR003591 -
Dere07g0313 1017 SMART LRR_typ_2 264 288 IPR003591 -
Dere07g0313 1017 SMART LRR_typ_2 119 143 IPR003591 -
Dere07g0313 1017 SMART LRR_typ_2 167 190 IPR003591 -
Dere07g0313 1017 SMART LRR_typ_2 527 551 IPR003591 -
Dere07g0313 1017 SMART LRR_typ_2 337 358 IPR003591 -
Dere07g0313 1017 FunFam Receptor-like protein kinase HSL1 694 793 - -
Dere07g0313 1017 Gene3D Ribonuclease Inhibitor 338 644 IPR032675 -
Dere07g0313 1017 Pfam Protein kinase domain 713 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0313 Dere-ChrDere07 6041649 6044923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0313 47 1014 Receptor kinase-like Gene Family AT1G28440 60.998 0.0 1201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere07g0313 Pkinase 2.2e-46 CL0016