Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0312 ATGACTCAGTGCGCTGACCCTCTTCAAAATAATCATAGCAATATCAATATTGTGCACAGAACAACTTGTCCTTCATGTGGCCATCGTATCAAATGCCAAGACCAGCAGGGTGGGATTCATGAGTTACCTGGGCTTCCAGCGGGAGTGAAGTTCGATCCGAGTGACCAGGAGCTTCTTGAACATTTGGAAGCGAAGGTGAGGTCGGATATTCACAAGCTTCATCCGTTGATCGATGAATTCATTCCTACTCTTGAAGGCGAGAATGGAATCTGCTATACTCATCCCCAGAAGTTGCCAGGAGTTAGCAAAGATGGCTTGATCCGCCATTTCTTTCACAGGCCATCCAAAGCATACACCACAGGAACAAGGAAAAGGAGAAAGGTACACTCAGAAGCAGATGGGAGCGAGACAAGGTGGCACAAAACAGGCAAGACAAGGCCTGTCTATATTAGTGGAAAGCTCAATGGGTACAAGAAGATCCTCGTACTTTACACGAACTATGGCAAACAAAGGAAGCCTGAGAAAACAAACTGGGTCATGCACCAATACCACCTGGGAAACAACGAAGAGGAGAAAGAAGGAGAGCTAGTGGTGTCCAAGGTTTTCTATCAGACACAACCTAGGCAGTGTGGTTCACTTCTCAAGGGACAAGTTGTGCATCATCATCACCATGATGTGACAAATCTTCACAAGAACAATAATAATGGGTTCGTTGAATACTTTAACTCTGCGTTCATATCCTTCGATCAAGGTGGCCATCAAAGATCTGCGAATGCTCAAGTCATATCTCATTTTCCAGTTCATGATGCTTCTCCTTTCATTGCTTGA 828 0.4493 MTQCADPLQNNHSNINIVHRTTCPSCGHRIKCQDQQGGIHELPGLPAGVKFDPSDQELLEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPQKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSEADGSETRWHKTGKTRPVYISGKLNGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLLKGQVVHHHHHDVTNLHKNNNNGFVEYFNSAFISFDQGGHQRSANAQVISHFPVHDASPFIA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0312 275 SUPERFAMILY NAC domain 40 204 IPR036093 GO:0003677|GO:0006355
Dere07g0312 275 Gene3D NAC domain 54 208 IPR036093 GO:0003677|GO:0006355
Dere07g0312 275 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 11 217 IPR044799 GO:0003700
Dere07g0312 275 MobiDBLite consensus disorder prediction 124 139 - -
Dere07g0312 275 MobiDBLite consensus disorder prediction 118 139 - -
Dere07g0312 275 Pfam No apical meristem (NAM) protein 46 185 IPR003441 GO:0003677|GO:0006355
Dere07g0312 275 FunFam NAC domain-containing protein 73 54 208 - -
Dere07g0312 275 ProSiteProfiles NAC domain profile. 45 204 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0312 Dere-ChrDere07 6034312 6036752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0312 22 274 NAC Transcription Factor Family AT4G28500 61.871 1.70e-115 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g0312 NAM 3.1e-22 No_clan