Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0310 ATGCTGCTGGAGAAGATGGACGACGGAGAAATTTCAAATATTGGTTTTCCTCAGAACCACCCTCCAACTGCTGCATCATCTAATACTACTAATCCTCCTCCTCTTCCCAAGAGAAAGAGAAACCTCCCAGGAAACCCTGATCCTGAAGCGGAAGTCATAGCCTTATCGCCGAAGACTCTAATGGCGACCAACAGATTTCTGTGTGAAATATGCGGAAAAGGCTTCCAAAGGGATCAAAATCTGCAACTACATCGACGTGGGCATAACCTTCCATGGAAGCTGAAGCAGAGGACAAGCAAAGAGGTGAAAAAGCGAGTGTATGTGTGTCCAGAAAAAAGCTGCGTGCACAACCACCCTTCGAGGGCTCTGGGAGACCTGACTGGCATCAAAAAGCACTTTTGTAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGAGAAGTGCTCAAAGCGTTACGCTGTTCAGTCTGATTGGAAAGCCCACTCGAAGACCTGTGGTACCAGGGAATACAAATGTGACTGTGGCACCATCTTTTCACGGAGGGATAGCTTCATCACACATAGGGCCTTCTGTGATGCCTTAGCGGAAGAGACAGCTAGAGTTAACGCAGCATCTAGCATAAACAACAATATAAGTTACAACAACATAATTGGAGCTGCTTCACTAGGGCCTAGCAATAACATGGCAACCCATTTTCCTTCAATCTTCAAGCCAATTTTAAACAACGCCGATGAAGCAAATAATCAAACACCTAGAGGGCTATCCCTATGGATGGGTCATCAACCTCACCATGCTGATCATCACACAATAATGCCTAATAATGGTAGTATCAATAATCTTCACGATCAGATTCATCGTCAACTTGGGAATCACCCACTTGTTTCACAACACCAACAGCTAAACTGGGTGTTCGGAAATAAGCTTTCAAATTCTTCCTCCTGTGAAGAGCTCACAAGCACCTCAATTGGAATGGTAAGTGTTCCTTCCTTGTATAGCTCCCAACATCATCAAACCTATCAAACATCTTCGGCGAACATGTCGGCGACAGCCCTGTTGCAGAAAGCTGCTCAAATTGGAGCAACCTCGACCACTTCTGATCCATCATTTCTTGGGAGCTTAGGGTTGAAATGTAGTAGCACCATTAACACAAGTCAAGGTGGTCAAGAAGATGATCATGGGAGTAACAAATATTATGGGATGTATGGCTCAGGTTCAGTGCTGACTAGCCTTGGCGGTGGAGGAAGTGATCAGACGACAGAGAACAACTCAGCAAGTGATTTGCCACAAATGCACCCTGCAAAACGCCCCAGGCAAGTAGTGCAGAATGAAGAACTAAGTGCAGGAGGAGGAGGGCAAACTAGGGATTTCCTTGGTGTAGGAGTGCAAGCCATTTGCCACCCTTCATCAATCAACGGATGGATCTGA 1422 0.4599 MLLEKMDDGEISNIGFPQNHPPTAASSNTTNPPPLPKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVKKRVYVCPEKSCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASSINNNISYNNIIGAASLGPSNNMATHFPSIFKPILNNADEANNQTPRGLSLWMGHQPHHADHHTIMPNNGSINNLHDQIHRQLGNHPLVSQHQQLNWVFGNKLSNSSSCEELTSTSIGMVSVPSLYSSQHHQTYQTSSANMSATALLQKAAQIGATSTTSDPSFLGSLGLKCSSTINTSQGGQEDDHGSNKYYGMYGSGSVLTSLGGGGSDQTTENNSASDLPQMHPAKRPRQVVQNEELSAGGGGQTRDFLGVGVQAICHPSSINGWI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0310 473 FunFam protein indeterminate-domain 12-like 45 113 - -
Dere07g0310 473 MobiDBLite consensus disorder prediction 1 49 - -
Dere07g0310 473 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 88 IPR013087 -
Dere07g0310 473 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Dere07g0310 473 MobiDBLite consensus disorder prediction 408 452 - -
Dere07g0310 473 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 25 461 IPR031140 -
Dere07g0310 473 Gene3D Classic Zinc Finger 99 190 - -
Dere07g0310 473 SMART c2h2final6 142 162 IPR013087 -
Dere07g0310 473 SMART c2h2final6 107 137 IPR013087 -
Dere07g0310 473 SMART c2h2final6 66 88 IPR013087 -
Dere07g0310 473 MobiDBLite consensus disorder prediction 408 427 - -
Dere07g0310 473 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
Dere07g0310 473 SUPERFAMILY beta-beta-alpha zinc fingers 65 162 IPR036236 -
Dere07g0310 473 Gene3D Classic Zinc Finger 62 89 - -
Dere07g0310 473 MobiDBLite consensus disorder prediction 16 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0310 Dere-ChrDere07 6008753 6011162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0310 33 473 IDZ Gene Family AT1G03840 52.789 2.71e-151 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere07g0310 None None None