Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0302 ATGGAAGCCCATAGCGAAGAGCATGCAAGACTTCTCCGTGGTCAAATCCACATATTTCACCACTCATTGAGCTTCATAAACTCAATGACCCTCAAAGCAGCTATAGACTTAAACATTCCGGACATCATTCACAAGCATGGCAAACCCATGCCTCTTCCCCAGCTCATCTCTTCCCTTCAAATCCACCCCTCCAAATCCCATAAGCTCTATCGCCTTATGCGAATCCTCACCCATTTCGGTTTATTCTCTCTCCAAACGGTTTCAGAAGTTGACCCATCAGAAGAGGGCTATGTCCTAACCGATGCATCCACCCTTCTTCTTAAGGACAGCCCTTTCAGTTTGGCGCCTTTGGTGCTCTACGCCATGGACCCAATTCTAACAAAGTCGTGGTATGAGATGGCTAATTGGTTCCAAAATGACGATCCGACGCCATTTGATACAGCACATGGTATGACATTTTGGGACTATGCTGGGGATGAGCCTAAGTTGAATCAATGTTTCAATGAAGGTATGGCAAGTGAAGCGAGGTTGGGGACGAGTGTAATGATGGAGAAATGTAAAGGAGTGTTTGAGGGGTTGGAGTCGTTGGTGGATGTAGGGGGTGGCACAGGGACTGTGGCTAAGGCCATTGCTGAAGCGTTTCCGAAAATGGAGTGTATAGTGTTCGACCTTTCACATGTTGTTGCTGGTCTACAAGACAGTGGGAATCTCAAGTTTGTCAGAGGGAACATGTTCGAGGCTATTCCTCCTTCCAATGCCATATTATTAAGGTCGGTACTGCACGATTGGAACGATGCAGAGTGCGTGAAAATACTGAAGAAGTGCAAGGAGGCTATTGCAAGCAAAGGGAAACAAGGAAAGGTCATTATAATAGACATGATAATAGACAACGAGAAGGGTGATGACAACAACAAATCGATTCAGTCTAAACTGTTCCTTGACGTGATGATGATGGTGTTTCATACTGGAAAAGAGAGGACTCTGAAAGAATGGGCTGATTTGATTTTTTCTGCTGGTTTCAGTGACTATAAGATAACACCAGTTCTGGGTTTAAAATCTCTCATTGAGCTCCAGGTGTATCCATAA 1086 0.4484 MEAHSEEHARLLRGQIHIFHHSLSFINSMTLKAAIDLNIPDIIHKHGKPMPLPQLISSLQIHPSKSHKLYRLMRILTHFGLFSLQTVSEVDPSEEGYVLTDASTLLLKDSPFSLAPLVLYAMDPILTKSWYEMANWFQNDDPTPFDTAHGMTFWDYAGDEPKLNQCFNEGMASEARLGTSVMMEKCKGVFEGLESLVDVGGGTGTVAKAIAEAFPKMECIVFDLSHVVAGLQDSGNLKFVRGNMFEAIPPSNAILLRSVLHDWNDAECVKILKKCKEAIASKGKQGKVIIIDMIIDNEKGDDNNKSIQSKLFLDVMMMVFHTGKERTLKEWADLIFSAGFSDYKITPVLGLKSLIELQVYP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0302 361 Pfam O-methyltransferase domain 130 341 IPR001077 GO:0008171
Dere07g0302 361 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Dere07g0302 361 Gene3D Vaccinia Virus protein VP39 107 359 IPR029063 -
Dere07g0302 361 CDD AdoMet_MTases 196 284 - -
Dere07g0302 361 Pfam Dimerisation domain 29 77 IPR012967 GO:0046983
Dere07g0302 361 FunFam Coniferyl alcohol 9-O-methyltransferase 1 106 - -
Dere07g0302 361 FunFam O-methyltransferase ZRP4 108 361 - -
Dere07g0302 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 359 IPR016461 GO:0008168
Dere07g0302 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 356 IPR029063 -
Dere07g0302 361 Gene3D - 1 106 IPR036388 -
Dere07g0302 361 PANTHER O-METHYLTRANSFERASE 15 344 IPR016461 GO:0008168
Dere07g0302 361 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0302 Dere-ChrDere07 5862821 5864116 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0302 29 357 Monolignol Biosynthesis Gene Families AT5G54160 34.234 1.47e-54 181