Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0297 ATGGAAGCCCATAATGAGGAGCATGCAACAGCAAGACTCCTTCGTGCAGAAACCCATGTACGGAACCACATATTCCGCTTCATAAACTCAATGTCCCTCAAATCAGCCATAGACTTGGGCATTCCAGACGTCATTCACAAATATGGCAAACCCATGCCTCTTACCCTACTCATCTCTTCCCTTCAGATCCACCCTTCCAAATCCCCTGACATCTCTCGCTTAATGCGAATCCTCACCCATTCTGGCTTCTTCTCTCTCCAAAATTTTCAAGAAAATGACCAATCAGAAGAGGGCTATGTCCTTACTGACGCATCTAATCTTCTTTTGAAGGATCACCCCTTCAGTCTAGCCCCTTTGGTGCTTGCTGAGCTGGACCCAATCCTTATAAAGCCATGGTATCAGGTGGCTAATTGGTTACGGAATGACGATCCTACACCGTTTATCACAGCACATGGGAAGACATTGTGGGAGTATGCGGAGCATGAGCCTAAGCTTAATCATTGTTTCAATGATGCAAGTGATTCAAGCTTTGTGGCGAGTGTGGTGATAGAGAAGTGTATGGGGGTGTTTAAGGGGTTGCATTCGTTGGTGGATGTTGGGGGTGGCACTGGGACCATGACTAAGGCCATTGCTAAGGCGTTTCCAGAAATGGAGTATACTGTGTTCGATTGGGTGCTGCAGGGTTGGAACGACGAAGAGTGTGTGAAAGTACTGAAGAAATGCAAGGAGGCAATAGCAAGCAAAGGGAAAGAAGGAAAGGTGATTATAATAGAAATCATATTGGAAAATGCGGATGGAGATAAAGATTATAAATTAGTTGAGACTCAACTGTTTTCTGATATGCTAATGATGTCTGCGGTCACTGGAAAAGAGAGGAATGAGAAAGAATGGGCCACATTGTTCTTCTCCGCTGCTTTCAGTCACTACAAGATTTCTCCAATTCTGGGTTTTCGATCTCTCATTGAGGTTTATCCATAA 978 0.4458 MEAHNEEHATARLLRAETHVRNHIFRFINSMSLKSAIDLGIPDVIHKYGKPMPLTLLISSLQIHPSKSPDISRLMRILTHSGFFSLQNFQENDQSEEGYVLTDASNLLLKDHPFSLAPLVLAELDPILIKPWYQVANWLRNDDPTPFITAHGKTLWEYAEHEPKLNHCFNDASDSSFVASVVIEKCMGVFKGLHSLVDVGGGTGTMTKAIAKAFPEMEYTVFDWVLQGWNDEECVKVLKKCKEAIASKGKEGKVIIIEIILENADGDKDYKLVETQLFSDMLMMSAVTGKERNEKEWATLFFSAAFSHYKISPILGFRSLIEVYP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0297 325 Gene3D Vaccinia Virus protein VP39 109 223 IPR029063 -
Dere07g0297 325 PIRSF O-mtase 1 223 IPR016461 GO:0008168
Dere07g0297 325 PIRSF O-mtase 223 325 IPR016461 GO:0008168
Dere07g0297 325 Gene3D - 1 108 IPR036388 -
Dere07g0297 325 Gene3D Vaccinia Virus protein VP39 224 325 IPR029063 -
Dere07g0297 325 Pfam O-methyltransferase domain 224 307 IPR001077 GO:0008171
Dere07g0297 325 Pfam O-methyltransferase domain 132 223 IPR001077 GO:0008171
Dere07g0297 325 PANTHER O-METHYLTRANSFERASE 20 310 IPR016461 GO:0008168
Dere07g0297 325 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 325 IPR016461 GO:0008168
Dere07g0297 325 FunFam Coniferyl alcohol 9-O-methyltransferase 3 108 - -
Dere07g0297 325 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Dere07g0297 325 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 324 IPR029063 -
Dere07g0297 325 SUPERFAMILY "Winged helix" DNA-binding domain 11 113 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0297 Dere-ChrDere07 5667303 5669815 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0297 31 311 Monolignol Biosynthesis Gene Families AT5G54160 30.769 2.66e-34 127