Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0288 ATGGAAGCCCATAATGGAAAGCATGATGCAGCAAGACTTCTTCGTGCTCAAACTCATGTATGGAATCACATCTTCCGGTTCATAAACTCGATGTCCCTCAAATTAGCCATAGACTTAGGCATTCCAGATGTCATTCACAAGCATGGCAAACCCATGCCTCTTCCGCTACTCATCTCTTCCCTTCAAATCCACCCATCAAAATCCCACAACATCTATCGTTTAATGCGAATCCTTACCCATTTTGGCTTCTTCTCACTCCAGAAGGTTCAAGAAAATGACCAAACAAAACAAGGTTATGTCCTAACCGACGCATCCACTCTTCTTCTAAAGGATCACCCCTTTAGTCTAACCTCATTGGTGCTTGCGGAGCTGGACCCAATCCTAACAAAGCCGTGGTATGAGGTGGCTAATTGGTTCCGGAATGATGATCCGACGCCGTTTATCACAACTCACGGAAAGACACTTTGGGAGTATGCTGGGCATGAGCCTAAGCTTAATGATTGTTTTAATGATGGTATGGCTCACGACTCGAAGTTGGTGGCAAGTGTAGTGGCAGAGAAGTGTATGGGGGTGTTTAAGGGGTTGGATTCATTAGTGGATGTTGGAGGTGGCACTGGGACCATGGCTAAGGCCATTGCTAAAGCGTTTCCAGAAATGGAGTGTACTGTGTTTGATCTCCCACACGTTGTCGATGGCCAGCAGGATAACGGGAATGTCAAGTTCATTGGAGGGGATATGTTCGACGGTATTCCTCCATCGAGTGGTGTACTGTTGAAGTGGGTACTGCACGATTGGAACGATGAAGAGTGTGTGAAAATACTGAAAAATAGCAAGGAGGCAATAGCAAGCAAAGGGAAAGAAGGAAAGGTGATTATAATAGATATGGTATTGGAGAACCAGAATGGAGATAAGGATGATGAGTTAGTCGAGGCTCAACTATTTTCTGATATGCTAATGATGGCTGTGGTTACTGGAAAAGAGAGAAATGAGAAAGAATGGGCCAAGTTGTTCTTCTCTGCTGGTTTTAGCAACTACAAGATGATTCCAATTTTGGGTTTCCGATGTCTTATCGAGGTTTATCCATGA 1086 0.4438 MEAHNGKHDAARLLRAQTHVWNHIFRFINSMSLKLAIDLGIPDVIHKHGKPMPLPLLISSLQIHPSKSHNIYRLMRILTHFGFFSLQKVQENDQTKQGYVLTDASTLLLKDHPFSLTSLVLAELDPILTKPWYEVANWFRNDDPTPFITTHGKTLWEYAGHEPKLNDCFNDGMAHDSKLVASVVAEKCMGVFKGLDSLVDVGGGTGTMAKAIAKAFPEMECTVFDLPHVVDGQQDNGNVKFIGGDMFDGIPPSSGVLLKWVLHDWNDEECVKILKNSKEAIASKGKEGKVIIIDMVLENQNGDKDDELVEAQLFSDMLMMAVVTGKERNEKEWAKLFFSAGFSNYKMIPILGFRCLIEVYP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0288 361 FunFam Coniferyl alcohol 9-O-methyltransferase 3 108 - -
Dere07g0288 361 Pfam O-methyltransferase domain 132 343 IPR001077 GO:0008171
Dere07g0288 361 PANTHER O-METHYLTRANSFERASE 14 346 IPR016461 GO:0008168
Dere07g0288 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 360 IPR029063 -
Dere07g0288 361 SUPERFAMILY "Winged helix" DNA-binding domain 12 113 IPR036390 -
Dere07g0288 361 Gene3D - 2 108 IPR036388 -
Dere07g0288 361 FunFam O-methyltransferase ZRP4 110 361 - -
Dere07g0288 361 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Dere07g0288 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 361 IPR016461 GO:0008168
Dere07g0288 361 Gene3D Vaccinia Virus protein VP39 109 361 IPR029063 -
Dere07g0288 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0288 Dere-ChrDere07 5291483 5293878 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0288 31 348 Monolignol Biosynthesis Gene Families AT5G54160 33.127 5.52e-52 175