LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere07g0283	ATGGATTGCAGATTACTTGTGCTGTCGTGCTTTTCCCTATTTGGTCGAGGATATCATTCATGTGCTCAAGCAGCATATACGCTGAGTGATGACGAGAAAGAGTTAGAGAAACAGAATCGAGGATCCAGTCTGTGTTTGTCTCGTTTCTCCTTTCTTCAAGGCAGCTGCGAAAGGAGAAAGGGAATGATGAAAGACGATTCGAAGAGCAAGTTTGGATCTTCCTCTCATCAAGCCATGAAGGAAAAGGCACAAAACTGGGTTGATGAACTTCAAGGAATTTTTACCAGTCTTCAACATGCAAGAAAAGAGAGTATGGCTAATGACATTGTAATGTTGGAGGAGCAGGTGCATCAGCTACTTCGAGAGTGGAAAGCAGAGCTGAATGAGCCAACTCCAGCTTCATCCTTAGTTGATGGAAATATTGGATTATTTCCCGGGGAACTCAGCCAACTGTTGCAACAGATTGAGGAGCAAGATGATGCAACTAGTGGATTAGCAAAGGCTGCAGTTGCACCACTGAAGACTGAGTTGCTTCCTCATAATCTTAATGAAAGCAGTTATCCATCATTTCAAGAGAAGTGCTTTGATGATAACCAGCCACAAGCTCATGCTTTTGAATCGTTTGATCAATTTGAATGCTCTGCTTCAACTTTGTACAACAATGCTGTTAATAACTCCAATATGATGACTCAGTTGGAACTTCATCAATTTGGTTTAAATCAAGATTTTGACAACACAGTAGGTCATAACTCTGATTTGATTGCTCAGTTTGATTCATACCAGGACTATAATTACAACACAGTGATAAAAAACTCAGATTCAACTCAATTAAGTTTACATGAAGGCTTGGACTGTGGGCAATTTGTTGTAGCTCATGACCCCGAACAAGGTGGAGAAGATACTAAACCTAACATTCTTCGATATATCCGTCCTCCACCTTCTGCCATTTTAGGACCAAAATGTGCTCAATGGGATTGCTTTAGGCCTGCTCTTGGGATAAAATCATGCCAGGACTACTGCAGTAGCTGTCATGAATTTCTGGCATATAACGAGGCTCTTCCTGGCATGACTCCAATTTTGCGACCTATGGGCATTGGTGTAAAAGATGGTCCTCTTTTTGCTGCTCTTAATGCAAAGACACAGGGAAAGGAAGTGGGCATCCCTAAATGTGAGGGTGCTGCTTCAACTAAATGCCCCTGGAATGCTCCTGGGTTATTTGATCTTTCTTTTCTCGAGGGTGAAACAGTGAGGGAATGGCTCTTTTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAACCAGAAAGCAGAGATCACTCCCAGATTACAGCGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACATGGAGGACTGAAGAGGTCCTATTACATGGATCCTCAGCCTCAATGTGATCGTGAGTGGCATTTGTATGAATATGAGATCAGTAAACACGATGGCTGTGCATTGTACAGACTGGAACTAAAGCTTGTGGATGGAAAGAAAAGTCCTAAAGGAAAAGTGACTAAGGAATCTCTTGCTGATTTACAAAAGAAGATGGGAAGGCTAACTGCTGATGTTCCAGAAGATGATCAAGACCCTTTTAAAGGAAAAACCAAGGCTCAGTTTGAGAATCTTAGGTCTTGTGGCTGA	1659	0.4237	MDCRLLVLSCFSLFGRGYHSCAQAAYTLSDDEKELEKQNRGSSLCLSRFSFLQGSCERRKGMMKDDSKSKFGSSSHQAMKEKAQNWVDELQGIFTSLQHARKESMANDIVMLEEQVHQLLREWKAELNEPTPASSLVDGNIGLFPGELSQLLQQIEEQDDATSGLAKAAVAPLKTELLPHNLNESSYPSFQEKCFDDNQPQAHAFESFDQFECSASTLYNNAVNNSNMMTQLELHQFGLNQDFDNTVGHNSDLIAQFDSYQDYNYNTVIKNSDSTQLSLHEGLDCGQFVVAHDPEQGGEDTKPNILRYIRPPPSAILGPKCAQWDCFRPALGIKSCQDYCSSCHEFLAYNEALPGMTPILRPMGIGVKDGPLFAALNAKTQGKEVGIPKCEGAASTKCPWNAPGLFDLSFLEGETVREWLFFDKPRRAFESGTRKQRSLPDYSGRGWHESRKQVMKEHGGLKRSYYMDPQPQCDREWHLYEYEISKHDGCALYRLELKLVDGKKSPKGKVTKESLADLQKKMGRLTADVPEDDQDPFKGKTKAQFENLRSCG	552

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere07g0283	552	Coils	Coil	102	122	-	-
	Dere07g0283	552	PANTHER	TRANSCRIPTION FACTOR VOZ1	63	546	IPR039277	GO:0006355\|GO:0048578
	Dere07g0283	552	MobiDBLite	consensus disorder prediction	521	552	-	-
	Dere07g0283	552	MobiDBLite	consensus disorder prediction	521	542	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere07g0283	Dere-ChrDere07	5205914	5213653	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere07g0283	62	530	VOZ-9 Transcription Factor Family	AT1G28520	53.814	7.41e-155	450

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Dere07g0283		None	None	None