Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0279 ATGCAAAGAAATAATAATGGAACACATCCAGCATGTGCAGCATGCAAACATCAAAGAAAAAAATGCAGTGTAAGCTGTGTGTTGGCACCATATTTTCCAGCAAACAGGAACAGAGAATTTCAAGCAGTGCACAAAGTTTTCGGAGTTAGCAACATAACAAAGTTGGTGAAGAATGCGAAGGATCAAGAGGAAAGAAGAAAGGTTGTGGATTCATTAGTGTGGGAAGCATTTTGCAGGCAAAAGGATCCAATTCAAGGACCATATGGAGAGTACAGGAAGGTATATAATGAGTACAGAAGACTGTTGCAGGAGTCCAAGATTACAAAAGACCATAACCAAGTGTTGCATTTACCGTCTCCTGATCAGTTAAAGAACGTTCAAGAGCAGTTGACTGGATGGGACGAGAGCAAAGGAATGTATCGAGGGGAAGGAGGAGTTGAGAATGGATTAGATTTTATTCATCATGATCATCATAAGAACAATGGTATTATGGATTCTGCCATTTATGGATTAGATTTTTCACAAATAGAGAATTTGAGGCCTGAAGTTGTCATTAATCAATTTCAGCAACACCATCAACCATATTATATTTCAGGTAACAATAATATGATCTCTTGA 618 0.3803 MQRNNNGTHPACAACKHQRKKCSVSCVLAPYFPANRNREFQAVHKVFGVSNITKLVKNAKDQEERRKVVDSLVWEAFCRQKDPIQGPYGEYRKVYNEYRRLLQESKITKDHNQVLHLPSPDQLKNVQEQLTGWDESKGMYRGEGGVENGLDFIHHDHHKNNGIMDSAIYGLDFSQIENLRPEVVINQFQQHHQPYYISGNNNMIS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0279 205 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 119 - -
Dere07g0279 205 ProSiteProfiles LOB domain profile. 10 112 IPR004883 -
Dere07g0279 205 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0279 Dere-ChrDere07 5162727 5163344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0279 9 194 AS2 family AT1G06280 39.130 5.05e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere07g0279 LOB 2.6e-32 No_clan