Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0275 ATGATATCAGCTTTCGTTTACCATCCCCCGCCCAAACATGAAGTTTCCTTCGAACCTATCAGGCTACTAGACTGTATAATCCTTGAAAGGGTTGCTAGCAAACAAGGCAATGCCGCACTGTGTCCTATTTTGCATGAGCACGGATTTGGACACGTTGACATGTCAACTGTCTCCGAGAGAAAGTGTATCATGGCACAATTACCTCCCAAGATCCCAAACATGACGCCAAGTTGGTCTGACTTTTCTAATTCTTCTCAACAGAAGATGCCTTCCGTGGCAAGTTTGTCACCAGATGTTGTGGGCACCAGTGATCCCTCCTCCGTCAACGTCGCCACCACCACCACCGTGCCCCATCATCATCATCATCCGAACCTTTCCTGGGCGGATGAATTTCAGGACTTCTCGTTGGCGAGACGCCAGGCTCACCGCCGGTCGGCGAGCGATTCCATTGCCTTCCTTGAGGCACCGGTGATGTTGGATGATTGTCGTGTTAATTCTGGGAATGTACGACCGAGAGCTGAGAATGAGTTTGACAGGTTTGAAGAAGAGCAATTCATGTCCATGTTCAGTGATGACATGTCTGGGGCTGCCATGCCCTTTTCCGCTTCAAACCCTTCAAGCCCATCTGATCATAACAGCATTAATGATGAGAAAGAAATTACGAACCAACTCCAACAACACCAGAACCTGCAGAAGGAGAATGAACATCAGCAACCCGAGCAGCAGCAATTGAAACCTGAATCCGACGAGGTTGAAAGCCAATTAAGCAAGCAGCAGGAAACACAAGCTCCAAATGACACATCGACAACTTCTTCCTCTGACAAGATTACTGATCCTAAGAGGGTCAAAAGAATCTTGGCAAACAGGCAATCTGCACAAAGATCACGAGTGAGGAAGCTGCAATATATATCAGAGCTGGAACGAAGTGTAACTTCATTACGGGCTGAGGTTTCAGTACTGTCTCCAAGGGTTGCATTTTTAGATCATCAACGCTTGCTTCTAAATGTTGACAACAGTGCTCTTAAGCAAAGAATCGCCGCCCTTGCTCAAGACAAGATCTTTAAAGATGCTCATCAAGAAGCACTTAAGAAGGAGATAGAGAGACTAAGGCAAGTATATCATCAACAAAACCTGAAGAAGATGCAATGTGGTACAGGATCAGCATCTCCTTCACCAAATCCACAATGTCATGGTCTGACTGAAACGGAGCAGCTTCTCAATATCATGAAGGCAAAATATTCAGTGAGAAGAAGTATCATTCAGGGTGGTGAGGCCATTGGTTGTACTCTTCTGCTGCCATGA 1302 0.4624 MISAFVYHPPPKHEVSFEPIRLLDCIILERVASKQGNAALCPILHEHGFGHVDMSTVSERKCIMAQLPPKIPNMTPSWSDFSNSSQQKMPSVASLSPDVVGTSDPSSVNVATTTTVPHHHHHPNLSWADEFQDFSLARRQAHRRSASDSIAFLEAPVMLDDCRVNSGNVRPRAENEFDRFEEEQFMSMFSDDMSGAAMPFSASNPSSPSDHNSINDEKEITNQLQQHQNLQKENEHQQPEQQQLKPESDEVESQLSKQQETQAPNDTSTTSSSDKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLRAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQVYHQQNLKKMQCGTGSASPSPNPQCHGLTETEQLLNIMKAKYSVRRSIIQGGEAIGCTLLLP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0275 433 MobiDBLite consensus disorder prediction 80 120 - -
Dere07g0275 433 MobiDBLite consensus disorder prediction 238 254 - -
Dere07g0275 433 Coils Coil 359 379 - -
Dere07g0275 433 PANTHER BASIC LEUCINE ZIPPER 34 64 392 - -
Dere07g0275 433 Gene3D - 279 378 - -
Dere07g0275 433 CDD bZIP_plant_RF2 281 331 IPR044759 GO:0003700|GO:0006355
Dere07g0275 433 MobiDBLite consensus disorder prediction 197 211 - -
Dere07g0275 433 SMART brlzneu 276 340 IPR004827 GO:0003700|GO:0006355
Dere07g0275 433 MobiDBLite consensus disorder prediction 255 275 - -
Dere07g0275 433 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 283 298 IPR004827 GO:0003700|GO:0006355
Dere07g0275 433 MobiDBLite consensus disorder prediction 224 282 - -
Dere07g0275 433 MobiDBLite consensus disorder prediction 196 215 - -
Dere07g0275 433 MobiDBLite consensus disorder prediction 80 124 - -
Dere07g0275 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 278 330 IPR004827 GO:0003700|GO:0006355
Dere07g0275 433 Pfam Basic region leucine zipper 277 325 IPR004827 GO:0003700|GO:0006355
Dere07g0275 433 SUPERFAMILY Leucine zipper domain 280 334 IPR046347 GO:0003700|GO:0006355
Dere07g0275 433 FunFam Basic leucine zipper 61 279 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0275 Dere-ChrDere07 5105584 5111107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0275 64 358 bZIP Transcription Factor Family AT3G58120 53.822 7.72e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere07g0275 bZIP_2 6.1e-09 CL0018