Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere07g0267 | ATGGCTACTCCCGACGACAACGATCGTTTCATGTTCCCGGGAAATTTTCCAAGAAGATCTGAGTCCGTTCACAGCGACATGAACAGCAAGATCTTGCTCACAGCCATCATCTCCTTATCAGTCGTCTTAGTCCTCGTTTTCGCCCTTCATCTCTACGCAAGGTACGTCCTCCGCCGCCAAGCCCGCCGCCGCACCGCTATACACCATCTCAGCCTCGCGGTGGCCCACTACTCCTCCGGCGAGACTCCCCACAACACCGGCCTCGACCCCTCACTCATTGCCTCCTTGCCCATCTTCGTCTTCAAACGTAAAAAAGACAAATCCCAGAACGACACCGACGCCGACAACGACGATTCCTCTGTTATAGAATGCTCTGTTTGTTTGAGCAATCTGGAGGACGAAGAGACGGCGAGGATGCTGCCCAATTGCAAGCACGTTTTCCACGTGGGCTGTATTGACACGTGGTTGGCTTCTCATTCGACGTGCCCAGTTTGTCGAACCATGGCTCAGCCGGTGATCGAGCCGCAGCCTCGGGAGGGTCCGGTTCGGGTAGCTCTGCCTGCTGCGGATGACGCACCCACGGCTCCGCCCATTGTGGAGCCTGTTGTGGAAGGTACATCAGATGGCGGCGCGGCTAAAATTAGTGGCTCGAACTCAAGGTTGAGCTCCTTCAGAAGGATTCTCAGCAGGGAAAGATCGTTCAGAAGAATCCAACCTTCTTCTTCCTCTAGCCATGATGATAATACTGATCGTGATTTGGAGAGACAGTGA | 771 | 0.5435 | MATPDDNDRFMFPGNFPRRSESVHSDMNSKILLTAIISLSVVLVLVFALHLYARYVLRRQARRRTAIHHLSLAVAHYSSGETPHNTGLDPSLIASLPIFVFKRKKDKSQNDTDADNDDSSVIECSVCLSNLEDEETARMLPNCKHVFHVGCIDTWLASHSTCPVCRTMAQPVIEPQPREGPVRVALPAADDAPTAPPIVEPVVEGTSDGGAAKISGSNSRLSSFRRILSRERSFRRIQPSSSSSHDDNTDRDLERQ | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere07g0267 | 256 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 74 | 171 | IPR013083 | - | |
Dere07g0267 | 256 | Pfam | Ring finger domain | 123 | 166 | IPR001841 | - | |
Dere07g0267 | 256 | CDD | RING-H2_EL5-like | 123 | 166 | - | - | |
Dere07g0267 | 256 | SMART | ring_2 | 124 | 165 | IPR001841 | - | |
Dere07g0267 | 256 | MobiDBLite | consensus disorder prediction | 232 | 256 | - | - | |
Dere07g0267 | 256 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 20 | 171 | - | - | |
Dere07g0267 | 256 | SUPERFAMILY | RING/U-box | 123 | 177 | - | - | |
Dere07g0267 | 256 | ProSiteProfiles | Zinc finger RING-type profile. | 124 | 166 | IPR001841 | - | |
Dere07g0267 | 256 | FunFam | E3 ubiquitin-protein ligase ATL6 | 76 | 171 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere07g0267 | Dere-ChrDere07 | 5021598 | 5022368 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere07g0267 | 26 | 256 | C3H Transcription Factor Family | AT2G42360 | 46.352 | 6.32e-53 | 170 |