Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0257 ATGAGTTGCTGTGAAATGCTAAATCTCACTTGGGACCTTGGTTTGGATGCACTTTCATGCTGTTCAGAACATGCAATATTACTACTCCAATCCAGGGACCCATCAGACCATCTATTTAGGACCGTTGGATCCCGACGGTATTTCCATACTTCGAAGGAGGACAAGAAATCCGACATTCAAGAAAGCGCGGACCAAGCCGAAGATTCTGAAGCCTTAGAACTCGTTCTTTTTCAAGTGTCTGAATGCTACGTCTACATAATACCCCCAAGGAAGAGTGCAGCTTCTTACAGGTTTGTGATCAACTTCAAATTGTTACTCCGGGTCTGCTATGCTTATGATACGGCCGATGAATGGGATGTCAACAAATGGGCATGGGAAGGAACACTGAAAGTTATTAGCAAGGGAGAGGAATGCATTATAAGACTTGAAGATAAGAAAACAGGTGAATTGTATGCTCGGGCTTTCTTAAGAAATGGAGAGGCACATCCTGTGGAACCAGTTATTGACAGCAGCAGATATTTTGTTCTTCGCATTGAAGAAAACATAGATCTGGAAGAAAGGGTAGAAAGGCTAGAGCGAAAAATGGATACGATAAACAAAAGGATTGAAGTGATTAAGGAAATGGCTCTGGAGATACTTAACACTCTGAAGGAAATAAATGGAGGAGTCAAGGCTATAGTTAAGGCTCAGCTTCCATCAGTGACCAAGAAGAAACAAGAAATTGATCTGAAAGCATTGCTAGCTGAGTTAAGGGGAGAGAAGGTGGAGTGTCGAAAGAGAAAGCAACAGAAAGTGTGGAGACGATGGAAGAGATATAGGATTGGGATTAGTAGCCTCTTAGTTTTTCTCATCAGAAGGATTCCTATTACTGTAGTCTCATCCATAACATGGGCTGCTGGTTTGGCTGGGATGAATGACAAGTTTGGTACATTAACACTGAACAAATTCACAGTCAATAACTACTTAATGGGGTTCTTTATAAAAGATGTTTACAAGGGCGCTTCAGTTCGGTTTAGAGCTAGTCCTTCAAAGGTGGTGAATCAGGATTTCATAGATGATTGCATTGTTGGTATGTGGGGTGACCTAAAAGGGGTCAGAGATGGCACAACAGATATGGCAGACAGTACTTGGAGGTCTCCTTCTGATGGTGATCGTCTTCGACATGCTTTCATTGGCATAGGATTCCGAGAAAGAACAGAAGCATATGATTTCCAAGCTGCCTTGCATGACCATATGAAGTATCCTCCATATGTTGGCATTTACCATTTTTCTTGGTTTTCAGAAACTTCTTTTGTTATTCATGATCACATAAAGGAAGAGATGGAACAGCAGTACAAGCAAACTTCCTTGGTTGATTACAGTTTAAAAGATGGAGAGACTCTTCTACTGCAAATTAAGAACAATAAAAGTGGCCGCAGTGTGAGGTCCAAGTTTTTTGAGCAGGGTCTGAACAACAACTCCGAAGAAAAGGGCGATAAAAAAGTAGATGTACATAATATTAAGTTACCCCCACCTCCTCCGGCACCACTTTCACCTGTTTCTACCATGCTGAAGTCTCCAACAAACCCACCAAGAAGTTCGAGTCTTGAGAAAACTTCTATAGAAGAGACCCCTAAAACAATCAATGAAATCCGAGATTATCAGAGTTCTCCTGAAGATCAAAGCATACCAGATGATGACTTCGGTGATTTTCAAACAGCTGATGATAAGGTAGAACCACCTTGCAGGTCAAACGTCTCAAGGAGGAGGAATCATAAACTCTAG 1764 0.4155 MSCCEMLNLTWDLGLDALSCCSEHAILLLQSRDPSDHLFRTVGSRRYFHTSKEDKKSDIQESADQAEDSEALELVLFQVSECYVYIIPPRKSAASYRFVINFKLLLRVCYAYDTADEWDVNKWAWEGTLKVISKGEECIIRLEDKKTGELYARAFLRNGEAHPVEPVIDSSRYFVLRIEENIDLEERVERLERKMDTINKRIEVIKEMALEILNTLKEINGGVKAIVKAQLPSVTKKKQEIDLKALLAELRGEKVECRKRKQQKVWRRWKRYRIGISSLLVFLIRRIPITVVSSITWAAGLAGMNDKFGTLTLNKFTVNNYLMGFFIKDVYKGASVRFRASPSKVVNQDFIDDCIVGMWGDLKGVRDGTTDMADSTWRSPSDGDRLRHAFIGIGFRERTEAYDFQAALHDHMKYPPYVGIYHFSWFSETSFVIHDHIKEEMEQQYKQTSLVDYSLKDGETLLLQIKNNKSGRSVRSKFFEQGLNNNSEEKGDKKVDVHNIKLPPPPPAPLSPVSTMLKSPTNPPRSSSLEKTSIEETPKTINEIRDYQSSPEDQSIPDDDFGDFQTADDKVEPPCRSNVSRRRNHKL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0257 587 Coils Coil 181 208 - -
Dere07g0257 587 Gene3D - 76 192 IPR011993 -
Dere07g0257 587 Gene3D - 378 415 IPR011993 -
Dere07g0257 587 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 438 566 - -
Dere07g0257 587 MobiDBLite consensus disorder prediction 479 587 - -
Dere07g0257 587 SUPERFAMILY PH domain-like 384 414 - -
Dere07g0257 587 Coils Coil 236 256 - -
Dere07g0257 587 MobiDBLite consensus disorder prediction 514 535 - -
Dere07g0257 587 SUPERFAMILY PH domain-like 69 181 - -
Dere07g0257 587 MobiDBLite consensus disorder prediction 563 579 - -
Dere07g0257 587 Pfam Protein of unknown function (DUF1681) 385 465 IPR012466 GO:0006897|GO:0016020
Dere07g0257 587 Pfam Protein of unknown function (DUF1681) 73 181 IPR012466 GO:0006897|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0257 Dere-ChrDere07 4911479 4920324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0257 270 372 Primary Pumps ATPases AT1G80660 41.406 2.83e-15 77.4