Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere07g0240 | ATGGACGAAAGACGAGATGATGCAGGGCCATCGAACTCTTCATGGTGGCCTTCAGATTTTGTCGAAAAATTTGGATCTGTTTCTCTGGGTTCTCAAGAAGGGACCTTAAATAATAAAGAATCACCTATAGATTTTGAGCAAGATGTTTTGTCTCCTCAGAAAGCATCACAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCGGAGAAAAGACTCAAGGAAATTTTTGATAATATTCCGACATTGGATGAGATTCATGCTTTGGGTGGAGAGGGTCTAAAGGCTGATATCATTTTAGTGGATGCAGAGAAAGATAAAAAGTTATCGATGTTGAAGCAACTGATTGTGGCACTAGTTAAAGGGTTGAACTCAAATCCAGCTGCAATAATAAAAAAGATAGCTGGATTAGTTTCTGACTTTTATAAGCGGCCCAATGTGGAAAGTCCAGCAAAAGCTGCACTAGATGAAACCTCCCACATGTTTGAGAATCGAGGTGTCCAGATATTGGGACAAATAAAGCATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTGTTAGCAGATACTGTAGGTCTTGAATGTAGGCTCATGGTGGGTTTGCCAAATGATGGGGTTGTTGGATGTGTGGACTCATACAAGCATATGTCTGTGATTGTTGTATTAAATTCTGTGGAACTGATGGTTGATCTCATGCGATGCCCTGGCCAATTATTACCTCGATCAAACAAGGCAATTTTCATGACACATATTTCTGCAGAAGGAGAAAGTGATTCTGCAGAAAATGATTCCTGTGATTCGCCACTAGAACCAAACAGTCCTTTATATGGGGTTTCAGAGAAAGTTGATACTGACAGTGCCGAAAAAGAGGAAAGCCTCCCTTTTCAGAGGAAATTTGACGCATCTTCAAATGTATCAGGCCTTTCTTTGCGAGATCTAATGTTACGAGCAAATACAAGTCTGGATAGGAAATTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGGCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACAGCTAGTTCCAGCCCAGAACATCCGTCATTCCGAGCACGTGGGCGGTCCATGCTTGGCAGTGATAGGAAAGCACATAGAGATTTTGCTGATGATGAGGCTGCATCAAGGTCAGATGGTGCATCTTCATCAGAAGCTCGTAGAATTAGAAGAAGAAGCATCAGCATTACACCTGAGATTAGTGATGATATCGTAAGGGCTGTACGAGCAATGAATGAAACACTGAAGCAAAATCGCCTTTTGAGAGAGCAGGGGGATAATAGCTCATTGTCCCATTCTCCAAATGATACAAATAGTGTTGGAGACCTTAAGAAAAATGTGTCAAATTTCCATCGAGAGGGTCATATGAGATCTGCTCTGTATTCTCTTCAGTCTGATCAAGTAACTTCTCAGAAGGCAATGTCATTACCCTCTTCACCACATAATTATAGGGGTCAGACGTCTGAGAGAAGTGGGCTATCGAGGTATGGAGTGAACGAATTACAGTCGACGTGGAATAAAGTCCTTGAATCTCCGATGTTTAATAATAAACCCCTCTTACCATATGAAGAATGGAATATCGATTTCTCAGAAATAACTGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGAGAAGTCTTCCGTGGTGTATGGAATGGCACAGATGTTGCAATCAAAGTTTTTTTGGAGCAAGATTTAACTGCTGAGAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGGCTCCGACATCCAAATGTAATCTTATTTCTTGGTGCGTGCACAAAACCTCCACGGTTGTCAATGATTACTGAATATATGGAGATGGGATCATTGTATTACTTGATCCATTTGAGCGGTCAAAAGAAGAAGCTTAGCTGGCGGAGAAGACTAAAAATGTTGCGAGACATATGCAGGGGATTGATGTGCATACACCGTATGAAGATAGTTCACCGGGACCTGAAAAGTGCAAATTGTCTTGTGAATAAGCATTGGACTGTGAAGATCTGTGATTTTGGGCTTTCACGGATAATGATAGAATCTCCCATCAAAGATTCTTCATCGGCTGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGGAATGAACCATTCAATGAAAAATGTGATATCTTTAGCCTGGGGGTGTTGATGTGGGAGCTTTGCACCTTGAACAAACCGTGGGAGGGCATACCACCAGAGAGGGTGGTTTATGCTGTTGCTAATGAGGGATCTAGACTGGAAATTCCTGAAGGCCCGTTAGGCAGGCTTATTGCAGATTGCTGGGCAGAACCAAATGAACGGCCAAGTTGTGAAGAGATCCTTTCTCGCTTGCTGGACTGCGAGCACTCATTGTGCTGA | 2430 | 0.4243 | MDERRDDAGPSNSSWWPSDFVEKFGSVSLGSQEGTLNNKESPIDFEQDVLSPQKASQILWRTGMLSEPIPNGFYSVIPEKRLKEIFDNIPTLDEIHALGGEGLKADIILVDAEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALDETSHMFENRGVQILGQIKHGSCRPRAILFKVLADTVGLECRLMVGLPNDGVVGCVDSYKHMSVIVVLNSVELMVDLMRCPGQLLPRSNKAIFMTHISAEGESDSAENDSCDSPLEPNSPLYGVSEKVDTDSAEKEESLPFQRKFDASSNVSGLSLRDLMLRANTSLDRKLSLSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSFRARGRSMLGSDRKAHRDFADDEAASRSDGASSSEARRIRRRSISITPEISDDIVRAVRAMNETLKQNRLLREQGDNSSLSHSPNDTNSVGDLKKNVSNFHREGHMRSALYSLQSDQVTSQKAMSLPSSPHNYRGQTSERSGLSRYGVNELQSTWNKVLESPMFNNKPLLPYEEWNIDFSEITVGTRVGIGFFGEVFRGVWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMEMGSLYYLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMIESPIKDSSSAGTPEWMAPELIRNEPFNEKCDIFSLGVLMWELCTLNKPWEGIPPERVVYAVANEGSRLEIPEGPLGRLIADCWAEPNERPSCEEILSRLLDCEHSLC | 809 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere07g0240 | 809 | ProSiteProfiles | Protein kinase domain profile. | 553 | 809 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Dere07g0240 | 809 | SMART | serkin_6 | 553 | 802 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Dere07g0240 | 809 | Gene3D | Transferase(Phosphotransferase) domain 1 | 632 | 808 | - | - | |
| Dere07g0240 | 809 | SUPERFAMILY | Protein kinase-like (PK-like) | 527 | 801 | IPR011009 | - | |
| Dere07g0240 | 809 | CDD | STKc_MAP3K-like | 559 | 801 | - | - | |
| Dere07g0240 | 809 | MobiDBLite | consensus disorder prediction | 378 | 396 | - | - | |
| Dere07g0240 | 809 | ProSitePatterns | Protein kinases ATP-binding region signature. | 559 | 580 | IPR017441 | GO:0005524 | |
| Dere07g0240 | 809 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 355 | 801 | - | - | |
| Dere07g0240 | 809 | Gene3D | Phosphorylase Kinase; domain 1 | 546 | 631 | - | - | |
| Dere07g0240 | 809 | MobiDBLite | consensus disorder prediction | 352 | 411 | - | - | |
| Dere07g0240 | 809 | Pfam | Protein tyrosine and serine/threonine kinase | 554 | 801 | IPR001245 | GO:0004672|GO:0006468 | |
| Dere07g0240 | 809 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 53 | 248 | - | - | |
| Dere07g0240 | 809 | FunFam | Serine/threonine-protein kinase isoform 1 | 543 | 631 | - | - | |
| Dere07g0240 | 809 | MobiDBLite | consensus disorder prediction | 266 | 305 | - | - | |
| Dere07g0240 | 809 | MobiDBLite | consensus disorder prediction | 491 | 512 | - | - | |
| Dere07g0240 | 809 | MobiDBLite | consensus disorder prediction | 440 | 463 | - | - | |
| Dere07g0240 | 809 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 672 | 684 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere07g0240 | Dere-ChrDere07 | 4740578 | 4756383 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere07g0240 | 1 | 809 | MAP Kinase Kinase Kinase | AT3G58640 | 70.905 | 0.0 | 1186 |
Transcription factors information