Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0233 ATGTTTGTATTCCAAAACCCGGACCCATATGCTTCGCTCTCGCGTCTCGATCAGTTCAGCAACGAGCTTGTGTGTTGTGTCTCTAAACCTCCGAAAAGCCCTTTGGGTCCTTCACATTTACACTGTGCCTTCCACACTCTCATGGCGGCCCTGAAGCTGCTTCTCTCTCAAGCTCGCCGCCATTACCTCAACAACCATCATTCTTACTTCCACTCGCCCCTTTTTCTCGGGTGTTGGAGATCCCTTTGTTCTTCATCATCTTCATCTTCATCTTCACAGCCCGATGAATCAGAGTCAAATCCTTCAGCTCCCGGGAGACCCCCCCAACCCATTTCAATCCAGCCCATTTCATATCCGGTTAAACCTAAAGACCCTTCGCCAACAGATAGTACTGAACCCTCCGAAGCTGAGTTGCGAAATCAATCTCCGGCTTCACCGTCTCCTCGCCGTCTACGTGAACCGTCATTGGCGGCAGATACCGCGGAATCACGGCGGGCTTGGACCCGGGAAGATATTCGGTATGTAAAGGACGCGCCTTCGATATCGCCGGTGTCGTATCCTTTGCGGGTGGCGCCGCTTCCTGAAGATAAGGCTACTGCTGCTACTGAAGAAGGAGGAAAAGATGAAGGCGCGAAGGAGAACGAAGAAATTGAGGAGGAGAGGAGGAAAATTGAAGCGGCGGATCATTTGAAGAGGAGAATGATTAGAGCCGCGGAAGAGGAGAAGATACGGGTTCCTTTTCCGACTCTGTTGAAGGTGAAGCAAAAGGAAAAGCCTCCTATCCTTGATTTGGCGGAGGCGATTCGGCAAGTTAAGGCCAATTCCAAGGCAAAATTTGATGAAACTGTTGAAGTTCATGTAAGGTTGGGCATTGAATCAAAGCGCACAGAACTGGCAGTTCGTGGTACTATGATTTTGCCTCATGGTGCTCCTAAGGCTGTCAGCGTAGCTGTTTTTGCAGAAGGGGCAGAAGCAGAGGAAGCTAGAGCTGCAGGGGCTGATATAGTTGGTGGTAAAGAGCTTGTTGAGGAGATTGCTAATGGTCATAACAAGCTCAGAGTTGACAAGTGCTTCTCAACTCCGGGAATGGCACCTCATCTTGGAAAGATAGCACAATATCTTAGAAAGCGTAGATTGATGCCAGACAAGAAACTAGGTACTCTGACCGGTGATATTGCTGGGCAGTTGAAAGAGCTAAGACGGGGTCGTGTTGAGTTTAAAATGGAAAGTAAATCAATTGTGCATGCAGGAATAGGAAAGGTAAGCCTCACAGAGGAGAATTTACGTGAGAATATAGGCGCATTTATGAACGCTTTATTGTTTGCCAAGCCTGCTGGCTTAAAGAAGACTTCGAAATATGCTGGGTATGTGCTATCTGTCCATGTATGCAGCACGATGGGCCCAGGATTTCCTGTTTCAATACAATCGCTGTCCAGAGCAGCAGACAACTACAAGTCTCTGAATCTGGTTGATGATGGTGAGTATAAGAGGAAGGCGCAGATTGCTTTAGTAGCCATTGTGGTGCTTGCTTCCGTAGCCGTGGTTGCTCTGCTGCTTGCATTCAGCTACTATTGCTACATCCGCAACAAAGTCGCCAAGCGCCGCAAGAACCAGAAAAATGCTGACCATAGCGAGAAAAGTGAGTTTGCAAATCTGCAAGTTGTTGCTGAAAAAGGACTTCAGGTGTTCACTTTCAAGCAGTTGCATTCAGCAACTGGTGGCTTCAGCAAGTCAAATGTCATTGGTCATGGTGGATTTGGATTCGTTTACCGGGGAGTGCTCAATGATGGCAGGAAAGTTGCAATTAAATTCATGGATCAGGCAGGAAAGCAGGGAGAAGAAGAATTTAAAGTAGAGGTTGAATTGCTAAGTCGGCTGCGTTCTCCATATTTGCTGGCATTGTTAGGGTACTGCTCTGATAATAATCATAAACTGCTGGTGTATGAGTTCATGGCAAATGGTGGTCTGCAGGAACATCTTTATCCTGTCAGCAACTCTAATGTTATATCCATGAAGTTGGATTGGGAAACCCGCTTACGTATAGCACTTGAAGCTGCTAAGGGTTTGGAATATCTTCATGAACATGTCAGTCCCCCTGTCATTCACAGAGATTTTAAGAGCAGCAACATTCTCCTTGACAAAAAGTTTCATGCAAAAGTTTCTGATTTTGGATTGGCCAAGCTTGGATCTGATAAAGCTGGCGGACATGTCTCCACTCGAGTTTTGGGAACCCAGGGATATGTTGCTCCTGAATATGCACTAACAGGGCATCTAACAACGAAATCAGATGTGTACAGTTATGGTGTTGTACTTTTGGAGCTGCTCACTGGCCGAGTACCAGTGGATATGAAGAGACCACCGGGAGAAGGTGTTCTTGTTTCTTGGGCGTTGCCCCTTCTGACTGATAGAGAAAAGGTGGTAACGATTATGGATCCTGCATTGGAAGGTCAGTACTCCATGAAAGAGGTTGTCCAAGTAGCAGCAATTGCTGCAATGTGTGTGCAACCTGAGGCAGATTACCGCCCGCTCATGGCGGACGTTGTTCAGTCATTAGTTCCACTGGTGAAGACTCACAGATCGACTTCTAAGGTAGGCAGCTGCTCTAGTTTCCATGCTAATAGGCTGTCGCCTGCTCAAGATTCAGTGAGAGCAAATGTATGA 2661 0.4709 MFVFQNPDPYASLSRLDQFSNELVCCVSKPPKSPLGPSHLHCAFHTLMAALKLLLSQARRHYLNNHHSYFHSPLFLGCWRSLCSSSSSSSSSQPDESESNPSAPGRPPQPISIQPISYPVKPKDPSPTDSTEPSEAELRNQSPASPSPRRLREPSLAADTAESRRAWTREDIRYVKDAPSISPVSYPLRVAPLPEDKATAATEEGGKDEGAKENEEIEEERRKIEAADHLKRRMIRAAEEEKIRVPFPTLLKVKQKEKPPILDLAEAIRQVKANSKAKFDETVEVHVRLGIESKRTELAVRGTMILPHGAPKAVSVAVFAEGAEAEEARAAGADIVGGKELVEEIANGHNKLRVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTGDIAGQLKELRRGRVEFKMESKSIVHAGIGKVSLTEENLRENIGAFMNALLFAKPAGLKKTSKYAGYVLSVHVCSTMGPGFPVSIQSLSRAADNYKSLNLVDDGEYKRKAQIALVAIVVLASVAVVALLLAFSYYCYIRNKVAKRRKNQKNADHSEKSEFANLQVVAEKGLQVFTFKQLHSATGGFSKSNVIGHGGFGFVYRGVLNDGRKVAIKFMDQAGKQGEEEFKVEVELLSRLRSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPVSNSNVISMKLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVSWALPLLTDREKVVTIMDPALEGQYSMKEVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTHRSTSKVGSCSSFHANRLSPAQDSVRANV 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0233 886 CDD Ribosomal_L1 264 472 IPR028364 -
Dere07g0233 886 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Dere07g0233 886 Gene3D Transferase(Phosphotransferase) domain 1 651 870 - -
Dere07g0233 886 SUPERFAMILY Protein kinase-like (PK-like) 557 851 IPR011009 -
Dere07g0233 886 Gene3D - 309 402 IPR016095 -
Dere07g0233 886 MobiDBLite consensus disorder prediction 127 148 - -
Dere07g0233 886 Pfam Protein kinase domain 576 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0233 886 MobiDBLite consensus disorder prediction 101 115 - -
Dere07g0233 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Dere07g0233 886 Pfam Ribosomal protein L1p/L10e family 272 468 IPR028364 -
Dere07g0233 886 PANTHER OS07G0668900 PROTEIN 537 860 - -
Dere07g0233 886 MobiDBLite consensus disorder prediction 192 223 - -
Dere07g0233 886 CDD STKc_IRAK 581 854 - -
Dere07g0233 886 FunFam Receptor-like serine/threonine-protein kinase ALE2 651 868 - -
Dere07g0233 886 Gene3D Phosphorylase Kinase; domain 1 533 650 - -
Dere07g0233 886 SUPERFAMILY Ribosomal protein L1 255 473 IPR023674 -
Dere07g0233 886 ProSiteProfiles Protein kinase domain profile. 575 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0233 886 Coils Coil 207 227 - -
Dere07g0233 886 FunFam Serine/threonine-protein kinase PBS1 541 650 - -
Dere07g0233 886 MobiDBLite consensus disorder prediction 200 223 - -
Dere07g0233 886 MobiDBLite consensus disorder prediction 89 164 - -
Dere07g0233 886 FunFam 50S ribosomal protein L1 309 402 - -
Dere07g0233 886 Gene3D - 264 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0233 Dere-ChrDere07 4640845 4658488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0233 492 877 Receptor kinase-like Gene Family AT3G58690 79.534 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dere07g0233 Pkinase 1.6e-43 CL0016