Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0201 ATGGACTCAGAGCAGCTTTCCAGTTACAGTGTAGCTGGTATTGGACCAACTTATACATCAACTCATACTTCCTTTTCATCAGTACCCAGCAGGCTGCTTGGATCTTTGAAAGCTGACATAGGAAACTCAACTAATTCCTCCTTTACTACTCAGTTTGATTCTGATTCTCTTTCTTCATTGAGTGACAGCCAGGATAATAGGCACAGTTCTGGGGAGATCCTTTCTAGTGTTACCCCTTCTTGTAACTCTTCCCTGGAAACTAGTTACTATTTGCACAGATCAACCTCATCTGTGGATCGTCTCCAGGATGGTCCTCATACATATTCTGCAAGGCGCTCTCTTCTAAATGATGCAAATTGTAGCCAGAATATCAGACACGTGTTGCTAGAATTAGAGACGGCTCTTATGGCCCCTGACAAGGGTAATGAGGCTAACACATCAACTAGTGCTTTGGGTGAGAATGAGAGTAGTAGGCCCATGACTTCTGGCCATAGAAACAGACTCTGGAGCCATGACCAACAGTGCTTACAATATATTCAAAGTCAGCCATCTCTTGTTACTAGCAGTCGGAAGTCAAGTGAAGTTGCACATGAATTTCACAAAGAAATGGAGGAAGAATTGTTACAAAGTTTCCCATCAAGCAATTTGAGACAGTTGCTGATTGCGTGTGCAAAAGCATTCTCAGAAAACAACTTTAAGGATTTTGATCAGTTGATTGAAAGGGCTAGAAGTTGTGTGTCTATTACTGGGGAGCCAATCCAACGGCTTGGTGCTTATTTGGTAGAAGGGCTGGTTGCAAGGAAGGAGGCATCAGGGAGCAACATCTACCGTGCCCTTAGGTGCAGAAAGCCTGAAGGCAGTGACTTGCTCTCTTACATGCATATGCTGTATGAAATCTGCCCATACTTGAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCAGAAGCTTGCAGAAACGAGAATCGTATTCACATCATAGATTTTCAGATTGCTCAGGGAATTCAATGGGTGACTCTCCTTCAAGCTCTTGCAGCAAGACCTGGTGGGGCTCCCTATGTCAGGATAACAGGGATTGATGACCCTGTTTCTAGATATGCTCGTGGTGATGGCCTGGGGGCAGTTGGGAAACGATTGGCCACAATCTCTGAGAAATTTGGCATCCCATTTGAGTTTCATGGAGTACCTGTTTTTCCTCCTGATGTGACAAGAGACATGCTTGATATCCGGCCTGGGGAGGCTTTGGCTGTCAACTTCCCCCTGCAGCTCCATCATACAGCAGATGAGAGTGTTGATGTGAATAACCCAAGAGATGGGCTTCTGAGAATGGTAAAGTCACTTTCTCCCAAAGTGACCACACTGGTAGAGCAGGAATCAAACACAAACACAACTCCTTTCATCCACAGATTCACAGAAACCCTTGATTACTATCTAGCACTTTTCGAGTCTATTGATGTGACCCTCTCGAGAAACAGCAAGGAGCGGATTAATGTGGAGCAACATTGTTTGGCCAGAGATGTCGTGAATATTATTGCTTGTGAAGGGAAGGATAGGGTAGAGCGACACGAATTGTTTGGCAAGTGGAAGTGTAGGTTGACGATGGCTGGCTTTCGTCAATATCCCATGAGCTCTTACGTAAATTCTGTTATAAGGAGCCTGCTGAGATGCTATTCAGAGCATTATACACTAGTGGAGAAGGATGGTGCTATGCTGTTGGGGTGGAAGAGCAGAAATCTGATATCAGCCTCAGCATGGCATTGA 1761 0.4486 MDSEQLSSYSVAGIGPTYTSTHTSFSSVPSRLLGSLKADIGNSTNSSFTTQFDSDSLSSLSDSQDNRHSSGEILSSVTPSCNSSLETSYYLHRSTSSVDRLQDGPHTYSARRSLLNDANCSQNIRHVLLELETALMAPDKGNEANTSTSALGENESSRPMTSGHRNRLWSHDQQCLQYIQSQPSLVTSSRKSSEVAHEFHKEMEEELLQSFPSSNLRQLLIACAKAFSENNFKDFDQLIERARSCVSITGEPIQRLGAYLVEGLVARKEASGSNIYRALRCRKPEGSDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNENRIHIIDFQIAQGIQWVTLLQALAARPGGAPYVRITGIDDPVSRYARGDGLGAVGKRLATISEKFGIPFEFHGVPVFPPDVTRDMLDIRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRMVKSLSPKVTTLVEQESNTNTTPFIHRFTETLDYYLALFESIDVTLSRNSKERINVEQHCLARDVVNIIACEGKDRVERHELFGKWKCRLTMAGFRQYPMSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKSRNLISASAWH 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0201 586 ProSiteProfiles GRAS family profile. 207 586 IPR005202 -
Dere07g0201 586 MobiDBLite consensus disorder prediction 51 82 - -
Dere07g0201 586 Pfam GRAS domain family 216 585 IPR005202 -
Dere07g0201 586 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 193 582 IPR005202 -
Dere07g0201 586 MobiDBLite consensus disorder prediction 140 165 - -
Dere07g0201 586 MobiDBLite consensus disorder prediction 139 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0201 Dere-ChrDere07 4096679 4098439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0201 208 585 GRAS Transcription Factor Family AT5G48150 64.380 3.52e-176 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere07g0201 GRAS 1.9e-126 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0555 08 8593026 8594780 Dere07g0201 07 4096679 4098439 CCT
Dere07g0201 07 4096679 4098439 Dere07g0201 07 4096679 4098439 ECH