Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0200 ATGAAAGACGAGTCAATAGGACTGATAATTGGAATTTCCATAGGTGTGGTTATTGGAGTGGTTTTGGCAATTTCTGGACTTTTCTGTTTCAGATACCATAGGAAGCGTTCACTGATAGGCAATAGCAGTTCCCGGAGAGCAGCTGCCATACCCATTCGTACAAATGGTGCTGATTCTTGTACAATTCTATCAGATTCAACAATAGGTCCAGAATCACCTGTGAAGTCAGGAAGGAATGGCATGTCCTTCTTGGTTGACGGATTTAAGAAGAGTAGCATGGTTTCAGCTTCTGGAATACCTGAGTATTCATACAAGGATCTGCAGAAGGCAACATATAATTTCACAACACTCATAGGGCAAGGTGCATTTGGTCCTGTTTATAAAGCTCAGATGTCTACTGGAGAGACAGTGGCAGTTAAAGTTCTTGCGACTAATTCTAAGCAAGGGGAGAAAGAATTCCACACAGAGGTTATGTTGTTGGGGAGGTTACACCATAGGAACCTGGTGAATTTAATTGGATACTGTGCAGAAAAAGGTCAGCATATGCTTGTTTATGTCTACATGAGTAAAGGCAGCTTGGCTTCCCACTTGTATGGTGAAGGGAACAAGGCACTGAGCTGGGATTTGAGGGTTCATATAGCTTTGGATGTGGCAAGAGGCTTGGAATATCTTCATGATGGGGCAGTTCCTCCTGTGATCCATCGAGATATCAAATCTTCCAATATTTTGTTGGACCCGTCCATGCGAGCTCGGGTTGCTGATTTTGGGCTATCAAGAGAGGAGATGGTGGATAAGCATGCAGCCATAAGGGGAACCTTTGGGTATCTTGACCCTGAGTATATCTCTTCAGGGACATTCACCAAAAAAAGTGATGTGTACAGTTTCGGCGTGTTGCTTTTTGAACTTATAGCTGGCAGAAATCCTCAACAGGGTCTTATGGAATATGTTGAGCTCGCTGCAATGAACACTGAGGGTAAAGTTGGTTGGGAGGAAATTGTTGATGCTCGCCTTGAAGGGAAGTTTGATGTTCAAGACCTGAATGAAGTTGCAGCCCTTGCATACAAGTGCATGAACCGCACCCCAAGGAAACGGCCTTCAATGAGGGACATAGTGCAAGTCCTGACGCGGATTCTAAAGTCAAGGCACCCTAGGAGTCACCACAAGAAGGCCTTGTCTGCAACCGCAGATGAAGTAGCTTCCATTGATGGTGATCAACTAGAAACCAAGATTACTGTGACTGATCACAGGAGAGAAGAGTCTATGGATAGTGCAGTTGATGTCTATGAAGTATAG 1293 0.4432 MKDESIGLIIGISIGVVIGVVLAISGLFCFRYHRKRSLIGNSSSRRAAAIPIRTNGADSCTILSDSTIGPESPVKSGRNGMSFLVDGFKKSSMVSASGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLIGYCAEKGQHMLVYVYMSKGSLASHLYGEGNKALSWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDPSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDARLEGKFDVQDLNEVAALAYKCMNRTPRKRPSMRDIVQVLTRILKSRHPRSHHKKALSATADEVASIDGDQLETKITVTDHRREESMDSAVDVYEV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0200 430 PANTHER OS01G0750732 PROTEIN 5 389 - -
Dere07g0200 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Dere07g0200 430 ProSiteProfiles Protein kinase domain profile. 112 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0200 430 Gene3D Transferase(Phosphotransferase) domain 1 188 401 - -
Dere07g0200 430 CDD STKc_IRAK 118 377 - -
Dere07g0200 430 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0200 430 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
Dere07g0200 430 FunFam calcium/calmodulin-regulated receptor-like kinase 1 188 396 - -
Dere07g0200 430 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 86 187 - -
Dere07g0200 430 Gene3D Phosphorylase Kinase; domain 1 84 187 - -
Dere07g0200 430 SUPERFAMILY Protein kinase-like (PK-like) 101 386 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0200 Dere-ChrDere07 4065684 4069904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0200 29 374 Glycoside Hydrolase AT3G07070 40.548 2.70e-75 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Dere07g0200 PK_Tyr_Ser-Thr 9.4e-53 CL0016