Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0185 ATGCCAACAGTGTGGTTCTCTCTGAAAAGATCTCTTCACTGCAAGTCAGAGCCATCCGATGTTCATGACCCAAAATCGAAAAGACATCTAAGCACAATCTCCACCAAAAGAGCAGGACGATCTGGGTGTTCCAGAAGTATCGCCAATCTCAAAGATGTCATCAATGGAGGAAGCAAGAGGCACCTAGAGAAGCCCCCAAGTTGCAGCCCAAGATCCATAGGAAGCAGTGAGTTGCTCAACCCAATAACTCATGAAGTCATTGTTAGCAACTCCAGGTGTGAGCTGAAAATCTCCGGCTTCGGAGCCGCCGCAGCTGCTGGCGGAGGCGGCGGCGGGGGTTCAACGTTTGTGGGTACTTTGAGGCCTGGGACTCCTGGACCTGGAGGGTACCCTACAATGCATTACTTCAACCCTTCATTTAGGACTAGTTCTACTCCTCCAAGGAAATCCCCTCTTCTTGTATCAGAAAAGGAAGGAGGATTTGTTCATTCTTCAAGCAAGAGGTTATCTCTGGAGGCAGGTTCAAAAGGGTGTTCTTCTTCTGTGAGTTGTTACAAATGTGGAGAGCAATTTGGAAAATGGGAAGATGCTGAGGCTCATCATCTCTCAGAACATGCAGTGACAGAACTAGTAGAAGGAGACTCATCAAGGAAAATAGTGGAGATAATATGCAGAACGAGCTGGGTAAAGTCGTCGGAGAAGACCAAGCAGTGTGGAAGAATCGAGAAGGTTCTGAAAGTGCACAACAGGCAGAAAACAGTGTCTCGATTCGAAGAGTACAGAGAGAGCGTGAAGATGAGAGCCAGCAAGCTGCTGAAGAAGCACCCTCGCTGCCTGGCCGACGGCAACGAGCTTCTCCGCTTCTACGGCACCACCGTGTGTTGCTCGCTAGGCCTCAGCAACAGCAGCACCACCCTCTGCGTTTCTGAGAAGTGCAGTGTCTGCAGAATCATCAGAAATGGGTTCTCCGAGAAGGAGGAGGTGAAGGGTGGGAATGGGATAGGGATTTTTACAGCGTCTACGAGTGGAAGAGCGTTAGAGTGTACTGTGGGGGAGAATGATGGGGAAGAAGGAGGAGAGGAGAGGAAGGCGTTGATAGTGTGTAGGGTTATTGCAGGGAGGGTTCATAGGCCTTTGGAGAATGCGAAGGAGATGGTTGGGCAGAGTGGGTTTGATTCTTTGGCTGGAAAACTGGGGGTTTATTCCAATATTGAAGAGCTTTACTTGCTTAATCCCTCAGCTCTTCTTCCTTGTTTTGTTGTCATTTGCAAACCTTGA 1278 0.4914 MPTVWFSLKRSLHCKSEPSDVHDPKSKRHLSTISTKRAGRSGCSRSIANLKDVINGGSKRHLEKPPSCSPRSIGSSELLNPITHEVIVSNSRCELKISGFGAAAAAGGGGGGGSTFVGTLRPGTPGPGGYPTMHYFNPSFRTSSTPPRKSPLLVSEKEGGFVHSSSKRLSLEAGSKGCSSSVSCYKCGEQFGKWEDAEAHHLSEHAVTELVEGDSSRKIVEIICRTSWVKSSEKTKQCGRIEKVLKVHNRQKTVSRFEEYRESVKMRASKLLKKHPRCLADGNELLRFYGTTVCCSLGLSNSSTTLCVSEKCSVCRIIRNGFSEKEEVKGGNGIGIFTASTSGRALECTVGENDGEEGGEERKALIVCRVIAGRVHRPLENAKEMVGQSGFDSLAGKLGVYSNIEELYLLNPSALLPCFVVICKP 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0185 425 FunFam C2H2-like zinc finger protein 206 424 - -
Dere07g0185 425 Gene3D - 216 424 - -
Dere07g0185 425 MobiDBLite consensus disorder prediction 55 76 - -
Dere07g0185 425 ProSitePatterns Zinc finger C2H2 type domain signature. 184 205 IPR013087 -
Dere07g0185 425 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 423 - -
Dere07g0185 425 MobiDBLite consensus disorder prediction 16 41 - -
Dere07g0185 425 MobiDBLite consensus disorder prediction 16 30 - -
Dere07g0185 425 SUPERFAMILY ADP-ribosylation 207 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0185 Dere-ChrDere07 3884899 3887211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0185 1 425 C2H2 Transcription Factor Family AT5G54630 62.633 0.0 532