Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0182 ATGGTTCTTTTTACAACATCAGTTAGTTTAAAGGATTCGAAGGAAACACAGGAAGACTTTCTTCGCCAACTACTCGATCCGGCATCAGGATTGTTGACTGAGGAGACGGCAGAGCTATTATGGACCACTTGCTCAGTGGATTTGATTCAATTGAAGGAAGAGGTTGGAGATCTTGACTTATGCTTCCCAGAGGAATCATCATCCAGTTGCACGGATGATGTTGGTTCAGAAGTTCAATCACTAGCGCGAGAAAACATCCAAAAATTAATTAATGCTTGCCATCCTCAGTTGAAGCAAACCTTTCTTCACTGTTTGAGAAAGAATAATCTTCCAGTCCGTGGTGTATCTGGAGATGAGGATGATGACTTGAGATCCAATGCTCCTAGAAGAAATCTGGGTCTTGAGTTGCCTCAGCGCATATCAAAGCCACCTGGTCCTGGCCCTGCAGTTAAATCACATATCCATGCTCAAATACCACAATCACTACCACCAAAGAAATCTAAATCTTTACCTCCAGAGAGGGGACTTCCTCCCCAGGTTCTGCATGTAGTTGCTAAAAGTAAAAGTGATAAGGAAAAGAAAAGTAAAGACAAAAAAGGTGCTGATAAGAAAAGTGATAATGAAAGCGTGGTTATAGTTGCTGTTGCTGCAGCCGCTGCATCAGTGATACTTGTAGTGGTACTGCTCTGTGTTTGCTGTTGCTGTTGTAGGGAAAGCCAAGTTAGAAAAAATGATGAGAGGCCCCTTCTCAGCTTGAGCAGGAGTGACTACTCTGTTGGTTCTTCTCCCAAATATGCTTCTGGAAATTCAGTAAGGGATGAGAAATTTGGATTTCAGTCACACAGTAATAATTCAATTGACCACAAAAGGACCTCATCTCTGAATGACAATTTTCCTGTTGGATCTGATGTGCAGGAAATTCTATCAGCAGCAGCAGCCGGATCATCATTTGATCTGAAACCTCCTCCTGGTAGGGGGGGAACCAGCCTTTTGAAACCTCCACCTGGAAGGCCAGATCTTTCCCCTGAGCCTTCTGGTTCTTCTCTCAATAATGCTTCTGGAAATTCAGAAAATCTATCATCAGCTGCTGCTGCCAGACCCTCATTTGATCTGAAACCTCCTCCTGGTAGGGTGGGAACCAGCCCTTTGAAACCTCCACCTGGAAGGCCAGATCCCCTTCCCTCTGAGCCACCCTCTATTAAGCCTTCTGGTAATTCTGCTCCTCCTCCTCCACCACCTCCTGCCCCCCCTCAGCCTCCCAAAACTGCTGCTGGACCCCCTCCTCCACCACCCCCAGCACTACCCGGTGCCAGAAAAGGTGCTGGTGCACCACCACCACCTCCTAAGGGTGGTATTGGTCCTCCTCGACCGCCTCCCCCAATTGGTGCAAGGGTTGCTCGCCCTTTAGCTATACCCAAAAAACCAAAAGCTTCAGAGGCTGCGGAAGCTGCTGATTCAGAAGGTTATGCTGGTGCTCCTAAAGCAAAGCTAAAACCCTTTTTCTGGGATAAGGTTCAGGCCAACTCTAATCAATCAATGGTTTGGAATCAGCTTAAAGCGGGATCATTCCAGTTTGATGAAGAGATGATGGAGACACTTTTTGGCTATACCAATCCAGAGAAAAGCAAAGGTGAAGTCAAGAAAAGATCTAGCTCCCTAGACCACGCACCTCAGTTTATCCAGATCATTGATTCAAAGAAAGCACAAAATTTGTCAATTCTATTGCGAGCATTGAACGTGACTATGGAAGAAGTTAGTGATGCACTTCGTGAAGGAAATGAGCTTCCTTCAGAATTCATTCAATCCTTGCTCAAGATGCAACCAACGTCCGAGGAAGAACTTAAGCTTAGACTTTTCAGTGGCAACCTGTCTCAACTTGGGCCTGCTGAACGGTTCCTAAAAGCCCTTGTTGATATTCCATTTGCTTTTAAACGACTGGAAGCACTTCATTTCATGGGTACTCTTCAAGAGGAGCTCACCATTACTAAGGAGTCCTTTGCAATTTTAGAGGTAGCTAGTAATGAACTAAAAGGCAGCCGGCTGTTCCTGAAGCTTCTAGAAGCTGTTCTCAAAACCGGCAACCGTATGAATGATGGAACATTCCGTGGTGGTGCACATGCATTTAAACTTGATACACTCCTTAAATTATCTGATGTAAAAGGTGTAGATGGCAAAACAACACTCTTACACTTCGTTGTTAAAGAAATATGCCGGTCTGAGGGCATAAGAGCACTTCGTGGGGCTAAAGAGAGCAAGAGTTTCTCTAGCATTAAAACAGAAGACCTGTTTGAGGAAGTATCCAATGAATCCGAAGAACGCTATCGTGAAATTGGCCTTCAGGTGGTGTCACGTTTGAGCAGTGAGCTTGAGAATGTGAAGAAAGCAGCGGGTCTAGATGCTGACGTCTTAACAGGAACTACTGCAAAACTTGGGCATTCTCTCTTAAGAACCAAAGACTTCTTAAACAAAGACCTGAAGGAGTTAGACGTAGAAAGTAGAGGAGGGTTTTATCAGACGGTGGAGTGTTTTTTGGAGAATGCAGAGAACGAAGTAAGGAATTTGCTGGAAGAAGAGATCAAGATCATGGCTTTGGTGAAGAGTACAGGTGACTACTTCCATGGGAACTCTGGGAAGGATGAGGGGTTACGGCTGTTTGTGATAGTACGAGACTTCTTGGTCATATTGGATAAGGTATGCAAGGAGGTGGGAGATGCACAGAAGAAGGCAGCACAAGCAAAAACTCCGAAACAGGAGACTTCTAAGGCTTCTACTTCTGATATCCGCCCACCGCCTTCCCCCGATCACCGGAAGCAGCTTTTTCCGAAGGTAGCAGATAGGAGGATGGATGACTTTAGTTCAGACGATGAGAGTCCGTAG 2877 0.4532 MVLFTTSVSLKDSKETQEDFLRQLLDPASGLLTEETAELLWTTCSVDLIQLKEEVGDLDLCFPEESSSSCTDDVGSEVQSLARENIQKLINACHPQLKQTFLHCLRKNNLPVRGVSGDEDDDLRSNAPRRNLGLELPQRISKPPGPGPAVKSHIHAQIPQSLPPKKSKSLPPERGLPPQVLHVVAKSKSDKEKKSKDKKGADKKSDNESVVIVAVAAAAASVILVVVLLCVCCCCCRESQVRKNDERPLLSLSRSDYSVGSSPKYASGNSVRDEKFGFQSHSNNSIDHKRTSSLNDNFPVGSDVQEILSAAAAGSSFDLKPPPGRGGTSLLKPPPGRPDLSPEPSGSSLNNASGNSENLSSAAAARPSFDLKPPPGRVGTSPLKPPPGRPDPLPSEPPSIKPSGNSAPPPPPPPAPPQPPKTAAGPPPPPPPALPGARKGAGAPPPPPKGGIGPPRPPPPIGARVARPLAIPKKPKASEAAEAADSEGYAGAPKAKLKPFFWDKVQANSNQSMVWNQLKAGSFQFDEEMMETLFGYTNPEKSKGEVKKRSSSLDHAPQFIQIIDSKKAQNLSILLRALNVTMEEVSDALREGNELPSEFIQSLLKMQPTSEEELKLRLFSGNLSQLGPAERFLKALVDIPFAFKRLEALHFMGTLQEELTITKESFAILEVASNELKGSRLFLKLLEAVLKTGNRMNDGTFRGGAHAFKLDTLLKLSDVKGVDGKTTLLHFVVKEICRSEGIRALRGAKESKSFSSIKTEDLFEEVSNESEERYREIGLQVVSRLSSELENVKKAAGLDADVLTGTTAKLGHSLLRTKDFLNKDLKELDVESRGGFYQTVECFLENAENEVRNLLEEEIKIMALVKSTGDYFHGNSGKDEGLRLFVIVRDFLVILDKVCKEVGDAQKKAAQAKTPKQETSKASTSDIRPPPSPDHRKQLFPKVADRRMDDFSSDDESP 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0182 958 MobiDBLite consensus disorder prediction 112 206 - -
Dere07g0182 958 MobiDBLite consensus disorder prediction 314 465 - -
Dere07g0182 958 SMART it6_source 487 910 IPR015425 -
Dere07g0182 958 MobiDBLite consensus disorder prediction 912 927 - -
Dere07g0182 958 MobiDBLite consensus disorder prediction 378 465 - -
Dere07g0182 958 PANTHER FORMIN-RELATED 144 946 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dere07g0182 958 Gene3D Formin, FH2 domain 492 928 IPR042201 -
Dere07g0182 958 MobiDBLite consensus disorder prediction 254 298 - -
Dere07g0182 958 MobiDBLite consensus disorder prediction 185 206 - -
Dere07g0182 958 MobiDBLite consensus disorder prediction 906 958 - -
Dere07g0182 958 MobiDBLite consensus disorder prediction 343 363 - -
Dere07g0182 958 ProSiteProfiles Formin homology-2 (FH2) domain profile. 487 921 IPR015425 -
Dere07g0182 958 Pfam Formin Homology 2 Domain 492 894 IPR015425 -
Dere07g0182 958 SUPERFAMILY Formin homology 2 domain (FH2 domain) 500 911 - -
Dere07g0182 958 MobiDBLite consensus disorder prediction 930 958 - -
Dere07g0182 958 Coils Coil 837 864 - -
Dere07g0182 958 MobiDBLite consensus disorder prediction 113 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0182 Dere-ChrDere07 3836125 3843198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0182 416 949 FH2 protein (formin) Gene Family AT5G54650 60.187 0.0 577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0563 08 8660137 8666852 Dere07g0182 07 3836125 3843198 CCT
Dere07g0182 07 3836125 3843198 Dere07g0182 07 3836125 3843198 ECH