Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0177 ATGGTTTCCCCGGAAAGCTCGAATTGGTTTTTCGATTATGGCCTGATTGATGACATATCTGTCCCTGATGGGAGCTTCAGTGTCCCTGCTTCCGGGTTCACCTGGCCGGCGCAGGCCTTGAATGGTTCTTCGAATGTCAGTGCGGAAATTGATGGCTCCATGGTGGATTCTGATGGCCTCAAAGAGTCTGGTTCGAAGAAGAGGGGTAGATCTGATTCATGTGCTACTTCGAGCTCCAAGGCGTGTAGGGAGAAGTTGCGGAGAGATAGGCTGAATGACAAGTTTCTTGAATTGGGCTCAATTTTGGAGCCTGGAAGGCCTCCCAAAACAGACAAGGCTGCTATTTTGACTGATGCTGTCCGAATGGTGACACAACTACGGGGTGAGGCCCAGAAGTTGAAAGACTCAAATACGAGTCTTCAAGAGAAGATAAAAGAGTTAAAGGCTGAGAAGAATGAACTTCGCGATGAGAAACAGAGGCTCAAGGGAGAGAAAGAAAAGTTGGAGCAGCAGCTGAAAACTATCAATGTACCGCCCAGTTTCTTGCCTCCCCCACCTGCAATTCCTGCTGCATACGCTACTGCACAAGGCCAAGCCCCGGGGAATAAGTTGGTCCCATTCATTGGTTATCCAGGAGTTGCCATGTGGCAATTTATGCCACCCGCTGCAGTGGATACCTCACAGGATCATGTACTCCGTCCACCAGTTGCCTAA 714 0.4958 MVSPESSNWFFDYGLIDDISVPDGSFSVPASGFTWPAQALNGSSNVSAEIDGSMVDSDGLKESGSKKRGRSDSCATSSSKACREKLRRDRLNDKFLELGSILEPGRPPKTDKAAILTDAVRMVTQLRGEAQKLKDSNTSLQEKIKELKAEKNELRDEKQRLKGEKEKLEQQLKTINVPPSFLPPPPAIPAAYATAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0177 237 Gene3D - 78 154 IPR036638 GO:0046983
Dere07g0177 237 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Dere07g0177 237 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Dere07g0177 237 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 146 IPR036638 GO:0046983
Dere07g0177 237 Coils Coil 123 174 - -
Dere07g0177 237 FunFam Transcription factor bHLH34 66 124 - -
Dere07g0177 237 SMART finulus 81 132 IPR011598 GO:0046983
Dere07g0177 237 CDD bHLH_AtILR3_like 80 155 - -
Dere07g0177 237 MobiDBLite consensus disorder prediction 55 77 - -
Dere07g0177 237 PANTHER BHLH TRANSCRIPTION FACTOR 5 237 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0177 Dere-ChrDere07 3795416 3799171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0177 1 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 73.640 7.82e-122 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere07g0177 HLH 2.8e-10 No_clan