Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere07g0150 | ATGATGTCAAAGTCGTATACAAATCTTTTAGATTTGGCTTCAGGGAATTTCCCAGCAATGGGTAGGGAATTTAAGGAACAGAGGCGAATGTCAAGGACTATGAGTGTCCCTGGGATGATCTCAGAACTTGATGATGATCAAGCATACAGTGTTTCTTCTGATAATCCATCAGCTGCATCTAATGATCGGATAATCATTGTTGCGAATCAGCTTCCTTTGAGGGCAAAGCAAAAAGAGGACAATAAAGGATGGAGTTTCAGTAGGAATGAGGATTCATTGCTTTTACAACTTAAGGATGGTTTTCCAGAGGAAATGGAGGTTCTTTACATTGGGTCATTGCGGGTTGATATTGATCCTGCTGAACAGGACGATGTATCACAGTATTTGTTCGAAAAATTCAACTGTCTTCCTACATTTCTGCCCCGTAACGTTTTGGATAAATTTTATGATGGTTTTTGCAAAAGGCAATTATGGCCACTATTTCATTACATGTTACCATTTTCAACTGATAAATGCCAGCGATTTGATCGCTCTTTGTGGGAAGCCTATGTGTTGGCAAATAAACTTTTTTTTCAAAAGGTAGTTGAAATAATAAACCCAGAGGATGATTATATTTGGATTCATGATTACCATTTGATGGTGCTGCCAACATTTATAAGAAGGCGCTTTAACAGGGTAAAAATAGGATTTTTCCTGCATAGTCCCTTTCCATCGTCAGAGATATATAGGACTCTTCCTGTCAGGGAAGAGATACTAAAAGCTTTACTAAACTCTGATATCATTGGTTTTCACACATTTGACTATGCTCGTCATTTCCTATCCTGTTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCAAAGAGGGGGTACTTAGGATTGGAATATTATGGAAGGACTATCAGTATCAAGATTATGCCGGTTGGAGTTCACATGGGTCGGATTGAATCAGTTATGAGAATGTCAGATGAGGAGAGTAAGGTTAGAGAACTCAGACAAGAATATGAAGGAAAAACAGTGTTACTTGGTGTTGATGATATGGACATCTTTAAAGGAATTAATTTGAAGATTTTGGCTATGGAGGAGATGCTCAGAGAGCATCCTAAATGGCAAGGAAGAGCTGTGCTGATACAGATTGTAAATCCGCCTAGGGGCAGAGGGATACATCTAGAGAGCATCCTGGCTGAAATACAAGAAAGCTGCAGCAGGGTCAACAGAGTATTTGGACGGCCTGGCTACGAACCAATTGTTTTTATTGATAGAGCAGTTTCAATTATTGAAAAAGTTGCATATTACAGGATTGCTGAGTGTGTAGTTGTTACAGCTGTAAGGGATGGAATGAACTTAACTCCTTATGAATATATTGCTTGTAGACAGGGAATATCTGATTCTGATTCGTGTTCCGATGTTAGTGGATTGAAAAAGAGCATGCTCGTAATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGGGCTATCCGTGTCAACCCATGGAATGTTGAAACAACTGCAGAGGCCATGAATGAGGCCATCTCAATGAAAGATGCAGAGAAACAGTTGCGGCATGAAAAGCATTATCGGTATGTTAGCACTCATGATGTGGCTTATTGGTCACGCAGTTTCGTGCAAGATATGGAGAGGGCTTGTTCAGACCTTCTAAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTAGCACTTGACCCTAATTTTAGAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCAAGTAGTAGGGCCATTTTGTTGGATTATGATGGTACTGTAATGCCACAGAACTCCATTAATAAGAGTCCAAGTCAAGAGGTCATCTCCACTCTAAACACACTCTGTGCAGACTCCAAAAATGTTGTTTTCATTGTTAGTGGAAGGGGGAGGGATAGCTTAACCAAGTGGTTCACTCCGTGCAAAAAGCTTGGTATTGCAGCAGAACATGGGTTCTTCTTGAGATGGTCTCAAAGTGAAGAATGGGAAATTTGTGGTAAAAGCTCGGAATTTGGCTGGATGCAGATTGCTGAACCTGTAATGAGATTATATACAGAAGCAACTGATGGTTCCAACATTGAGAAAAAGGAAAGTGCTTTGGTCTGGCAATATCGGGATGCGGACCTTGGCTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTAGAGGGTGTATTGGCCAATGAGCCTGTTGCTGTTAAGAGTGGTCAGTTCATTGTTGAAGTAAAGCCCCAGGATGTGACCAAAGGGTTAGTTGCAGAAAGGATCTTTTCAACGATGGCAGAAAAAGGCAAACAGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAATTAGTAGTGCAATGTCTAGAAACATTCTTTCTGCCAATTCTTCAGTATATGCTTGCACAGTTGGACAAAAACCCAGCAAAGCTAAGTATTATCTGGATGATACTACTGAAGTAATAAGCATGCTAGAATCTTTAGCTGAAGAATTAGAGGAAGCCCCTTGA | 2547 | 0.4044 | MMSKSYTNLLDLASGNFPAMGREFKEQRRMSRTMSVPGMISELDDDQAYSVSSDNPSAASNDRIIIVANQLPLRAKQKEDNKGWSFSRNEDSLLLQLKDGFPEEMEVLYIGSLRVDIDPAEQDDVSQYLFEKFNCLPTFLPRNVLDKFYDGFCKRQLWPLFHYMLPFSTDKCQRFDRSLWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKIGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIESVMRMSDEESKVRELRQEYEGKTVLLGVDDMDIFKGINLKILAMEEMLREHPKWQGRAVLIQIVNPPRGRGIHLESILAEIQESCSRVNRVFGRPGYEPIVFIDRAVSIIEKVAYYRIAECVVVTAVRDGMNLTPYEYIACRQGISDSDSCSDVSGLKKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMKDAEKQLRHEKHYRYVSTHDVAYWSRSFVQDMERACSDLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKRASSRAILLDYDGTVMPQNSINKSPSQEVISTLNTLCADSKNVVFIVSGRGRDSLTKWFTPCKKLGIAAEHGFFLRWSQSEEWEICGKSSEFGWMQIAEPVMRLYTEATDGSNIEKKESALVWQYRDADLGFGSSQAKEMLDHLEGVLANEPVAVKSGQFIVEVKPQDVTKGLVAERIFSTMAEKGKQADFVLCVGDDRSDEDMFEIISSAMSRNILSANSSVYACTVGQKPSKAKYYLDDTTEVISMLESLAEELEEAP | 848 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere07g0150 | 848 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 62 | 549 | - | - | |
| Dere07g0150 | 848 | FunFam | Trehalose-6-phosphate synthase 2 | 676 | 755 | - | - | |
| Dere07g0150 | 848 | Gene3D | Glycogen Phosphorylase B; | 317 | 530 | - | - | |
| Dere07g0150 | 848 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 317 | 530 | - | - | |
| Dere07g0150 | 848 | SUPERFAMILY | HAD-like | 593 | 841 | IPR036412 | - | |
| Dere07g0150 | 848 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 592 | 709 | - | - | |
| Dere07g0150 | 848 | Pfam | Glycosyltransferase family 20 | 63 | 546 | IPR001830 | GO:0003824|GO:0005992 | |
| Dere07g0150 | 848 | Coils | Coil | 827 | 847 | - | - | |
| Dere07g0150 | 848 | CDD | GT20_TPS | 63 | 546 | IPR001830 | GO:0003824|GO:0005992 | |
| Dere07g0150 | 848 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 31 | 842 | IPR001830 | GO:0003824|GO:0005992 | |
| Dere07g0150 | 848 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 56 | 315 | - | - | |
| Dere07g0150 | 848 | NCBIfam | HAD-IIB family hydrolase | 595 | 796 | IPR006379 | - | |
| Dere07g0150 | 848 | Gene3D | Glycogen Phosphorylase B; | 55 | 316 | - | - | |
| Dere07g0150 | 848 | CDD | HAD_TPP | 594 | 833 | - | - | |
| Dere07g0150 | 848 | Gene3D | - | 721 | 847 | IPR023214 | - | |
| Dere07g0150 | 848 | Gene3D | - | 592 | 695 | IPR023214 | - | |
| Dere07g0150 | 848 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 722 | 848 | - | - | |
| Dere07g0150 | 848 | Pfam | Trehalose-phosphatase | 596 | 830 | IPR003337 | GO:0003824|GO:0005992 | |
| Dere07g0150 | 848 | NCBIfam | trehalose-phosphatase | 592 | 841 | IPR003337 | GO:0003824|GO:0005992 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere07g0150 | Dere-ChrDere07 | 3434549 | 3438563 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere07g0150 | 1 | 847 | Trehalose Biosynthesis Gene Families | AT1G06410 | 76.151 | 0.0 | 1359 |