Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0126 ATGGATCTTCTGTGCGATGCATACGGCAATGCCTCTGACGACGAAGAAGAACGCCCTAAACGCCAGAAGCTCGCACTTTCTTCCCCCATCCCGCCAAAACCCTACCTTCCTCCTCCTACGAGCCAGTGCCTGCACCACCAAACACAATCTTTGCCTTCTGGAAGATACATTTCCAAGCGAGAAAGAGCACTTTTAGGCGTTTCCCCTCCTGTTCCGGACCCAGTTCCGGTTCCGGCTTCGGTTTCATCTTCCGTCGCACTATCCGGAAGTATCTTGGATACTGACCTACCTCATAGCATTATATCGTTGTTGAGAAATAAAGCAAAAGGTCATCGAAGTATGAACATGATACCTGAAAAGTTATCTGTGGCTCTATATCACAATACAAAAGCTGTTAATGCTATACAATGGTCTTCTGCTTATGCTCATCTCCTTGCATCTGCTGGGATGGACAATATGGTTTGCATTTGGAACGTATGGAGTAGAGATCAGAAGAAAGCACGTGTATTTAACTTCCATAATGCAGCAGTGAAAGATGTGAAATGGTCTCGTCAAGGACACTCTCTACTCTCTTGTGGATATGATTGCACAACAAGGTTGGTTGATGTAGAAAAGGGGTTTGAGACTCAGATTTTCAGTGAAGATCAAATTGTTGGAGTTATAAAGTTCCATCCAGATAATTCAAACCTCTTCCTTTCTGGTGGTTCTAAGGGCCATATTAGACTATGGGATATCAGGACTGGCAAAGTAGCCCATGGCTTTACTCGCAGTTTAGGTCCAGTTCTGGATGTTGAGTTTACAATCAATGGAAAGCAGTTCATTTCTTCTAGTGATGTATCTAGGAGTAATGTCAGTGAGAACTCTATTATTGTTTGGGATGTGTCCAGACAGGTTCCGCTGTCTAATCAGGTTTACGTTGAAGCTTACACCTGTCCCTGCATACGGTGCCACCCATTCGAGTCTACTTTCGTTGCCCAGTCAAATGGGAATTATGTTGCAATTTTTACTGCCACTCCACCTTTCAGGCTAAACAAATATAAGAGATACGAGAGCCATGGGGTCTCTGGGTTCCCGATTAAGTGCAATTTCAGTCTGGACGGGAAGATGCTTGCTTCTGGTTCTTCAGATGGTTGTATTTACCTTTATGATTATCAGTCATCTAAGGTTGTCAAGAAAATCAAGGCCTATGACCAAGCATGCATAGACGTTGTTTTCCATCCTGTTATACCTAATGCTATTGCTTCATGCTCATGGGATGGAAGTATTTCGGTATTTGAGTAG 1281 0.4356 MDLLCDAYGNASDDEEERPKRQKLALSSPIPPKPYLPPPTSQCLHHQTQSLPSGRYISKRERALLGVSPPVPDPVPVPASVSSSVALSGSILDTDLPHSIISLLRNKAKGHRSMNMIPEKLSVALYHNTKAVNAIQWSSAYAHLLASAGMDNMVCIWNVWSRDQKKARVFNFHNAAVKDVKWSRQGHSLLSCGYDCTTRLVDVEKGFETQIFSEDQIVGVIKFHPDNSNLFLSGGSKGHIRLWDIRTGKVAHGFTRSLGPVLDVEFTINGKQFISSSDVSRSNVSENSIIVWDVSRQVPLSNQVYVEAYTCPCIRCHPFESTFVAQSNGNYVAIFTATPPFRLNKYKRYESHGVSGFPIKCNFSLDGKMLASGSSDGCIYLYDYQSSKVVKKIKAYDQACIDVVFHPVIPNAIASCSWDGSISVFE 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0126 426 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 21 426 - -
Dere07g0126 426 Pfam WD domain, G-beta repeat 127 158 IPR001680 GO:0005515
Dere07g0126 426 Pfam WD domain, G-beta repeat 349 383 IPR001680 GO:0005515
Dere07g0126 426 Pfam WD domain, G-beta repeat 167 200 IPR001680 GO:0005515
Dere07g0126 426 Pfam WD domain, G-beta repeat 221 244 IPR001680 GO:0005515
Dere07g0126 426 SMART WD40_4 163 202 IPR001680 GO:0005515
Dere07g0126 426 SMART WD40_4 247 293 IPR001680 GO:0005515
Dere07g0126 426 SMART WD40_4 205 244 IPR001680 GO:0005515
Dere07g0126 426 SMART WD40_4 118 158 IPR001680 GO:0005515
Dere07g0126 426 SMART WD40_4 386 426 IPR001680 GO:0005515
Dere07g0126 426 SMART WD40_4 344 383 IPR001680 GO:0005515
Dere07g0126 426 ProSiteProfiles Trp-Asp (WD) repeats profile. 363 392 IPR001680 GO:0005515
Dere07g0126 426 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 211 249 - -
Dere07g0126 426 MobiDBLite consensus disorder prediction 1 50 - -
Dere07g0126 426 Gene3D - 103 426 IPR015943 GO:0005515
Dere07g0126 426 ProSiteProfiles Trp-Asp (WD) repeats profile. 211 253 IPR001680 GO:0005515
Dere07g0126 426 SUPERFAMILY WD40 repeat-like 115 425 IPR036322 GO:0005515
Dere07g0126 426 ProSitePatterns Trp-Asp (WD) repeats signature. 145 159 IPR019775 -
Dere07g0126 426 ProSiteProfiles Trp-Asp (WD) repeats profile. 125 167 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0126 201 407 Miscellaneous Gene Families AT5G08390 19.231 7.84e-07 49.7